ID A0A0C1LLN1_9BACT Unreviewed; 333 AA.
AC A0A0C1LLN1;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=HTH lacI-type domain-containing protein {ECO:0000259|PROSITE:PS50932};
GN ORFNames=OI18_00305 {ECO:0000313|EMBL:KIC96248.1};
OS Flavihumibacter solisilvae.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Flavihumibacter.
OX NCBI_TaxID=1349421 {ECO:0000313|EMBL:KIC96248.1, ECO:0000313|Proteomes:UP000031408};
RN [1] {ECO:0000313|EMBL:KIC96248.1, ECO:0000313|Proteomes:UP000031408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3-3 {ECO:0000313|EMBL:KIC96248.1,
RC ECO:0000313|Proteomes:UP000031408};
RA Zhou G., Li M., Wang G.;
RT "Genome sequence of Flavihumibacter solisilvae 3-3.";
RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KIC96248.1}.
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DR EMBL; JSVC01000001; KIC96248.1; -; Genomic_DNA.
DR RefSeq; WP_039136017.1; NZ_JSVC01000001.1.
DR AlphaFoldDB; A0A0C1LLN1; -.
DR STRING; 1349421.OI18_00305; -.
DR OrthoDB; 667031at2; -.
DR Proteomes; UP000031408; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
DR PROSITE; PS00717; SIGMA54_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000031408};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 333 AA; 37290 MW; D609F499C037E909 CRC64;
MIKPVTIKDL ARQLNISIST VSRALRNAND INPDTKETVL KLARELEYEP NFIAQSLVKK
QTRIIGVVVP LINSNYFSEA LSGMTDLAIE QNYHLMICQS NERVDLENKS IRKLVACNIN
GLLISVSKDT KSPEVIREAQ NKNIPVVMFD RIIPEVSCTK VIVDEYEGAY KAVEHLIRKG
CKKIAHIGGP RDLSVSKKRK QGYLDALRDY KIEDDPKLII HCKSFEEDAS NAIRKVLAES
PDAIFCINDL TAIMAIQYAR KKGFSIPGDI RIVGFNNDPV SGVVQPALTT VMQPGYEVGK
LAMGVLIDEI EKKTAKHKLF TLRTRLVTRL SSR
//
