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Database: UniProt
Entry: A0A0C3C9K2_HEBCY
LinkDB: A0A0C3C9K2_HEBCY
Original site: A0A0C3C9K2_HEBCY 
ID   A0A0C3C9K2_HEBCY        Unreviewed;      1075 AA.
AC   A0A0C3C9K2;
DT   01-APR-2015, integrated into UniProtKB/TrEMBL.
DT   01-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=Rad4 beta-hairpin domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=M413DRAFT_19059 {ECO:0000313|EMBL:KIM40899.1};
OS   Hebeloma cylindrosporum h7.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Agaricineae; Hymenogastraceae; Hebeloma.
OX   NCBI_TaxID=686832 {ECO:0000313|EMBL:KIM40899.1, ECO:0000313|Proteomes:UP000053424};
RN   [1] {ECO:0000313|EMBL:KIM40899.1, ECO:0000313|Proteomes:UP000053424}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=h7 {ECO:0000313|Proteomes:UP000053424};
RG   DOE Joint Genome Institute;
RA   Kuo A., Gay G., Dore J., Kohler A., Nagy L.G., Floudas D., Copeland A.,
RA   Barry K.W., Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A.,
RA   Lipzen A., Lundell T., Morin E., Murat C., Sun H., Tunlid A., Henrissat B.,
RA   Grigoriev I.V., Hibbett D.S., Martin F., Nordberg H.P., Cantor M.N.,
RA   Hua S.X.;
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000053424}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=h7 {ECO:0000313|Proteomes:UP000053424};
RG   DOE Joint Genome Institute;
RG   Mycorrhizal Genomics Consortium;
RA   Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA   Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA   Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H., Tunlid A.,
RA   Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
RT   "Evolutionary Origins and Diversification of the Mycorrhizal Mutualists.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
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DR   EMBL; KN831781; KIM40899.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0C3C9K2; -.
DR   STRING; 686832.A0A0C3C9K2; -.
DR   HOGENOM; CLU_003639_2_0_1; -.
DR   OrthoDB; 181129at2759; -.
DR   Proteomes; UP000053424; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR   Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR   Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR   Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR   InterPro; IPR018327; BHD_2.
DR   InterPro; IPR004583; DNA_repair_Rad4.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR   InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR   InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR   InterPro; IPR042488; Rad4_BHD3_sf.
DR   InterPro; IPR002931; Transglutaminase-like.
DR   InterPro; IPR036985; Transglutaminase-like_sf.
DR   PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR   PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR   Pfam; PF10403; BHD_1; 1.
DR   Pfam; PF10404; BHD_2; 1.
DR   Pfam; PF10405; BHD_3; 1.
DR   Pfam; PF03835; Rad4; 1.
DR   Pfam; PF01841; Transglut_core; 1.
DR   SMART; SM01030; BHD_1; 1.
DR   SMART; SM01031; BHD_2; 1.
DR   SMART; SM01032; BHD_3; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
PE   3: Inferred from homology;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053424}.
FT   DOMAIN          477..531
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01030"
FT   DOMAIN          533..611
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01031"
FT   DOMAIN          618..692
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01032"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          236..323
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          732..765
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          786..847
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          889..909
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          937..1075
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..23
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        239..259
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        282..296
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        734..760
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        789..803
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        946..975
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        976..990
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1000..1015
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1038..1052
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1075 AA;  119037 MW;  850F58389B96E37B CRC64;
     MDSEEDSDLQ DDSEDEFDWE EVDVPEHQPE HLEITLQLNP KSTKAKGITH AERLIRIDCH
     KIHTIALISS ARVRNHWLND PLLHARLLSL TPLHLQNAFG MIHKSRVPDQ NQRGRMFERA
     IEALNNWWSE SFFEVIPEGH IRNRTFDEIQ QKLEIRGLHV KNEYDPDATL DEEVLQDIVE
     DEVETIRSSK SLMKHALMRS GSRDTSAQLF TALCRAVGIP ARLVVSVQSV PWQASVGRPK
     PKYERKPKGK GKETIVPENE VEELSPSASE SLGQNGRRLD GEPVSQKSEK AKGKEKAKPV
     IKLRKQKSKG NVLGAGPSRL ASPDPLTTPP VFWTEVFSRP DARWFPVDPV RGITNKRKAF
     DPSPSTFNPN AAPPSTMFPQ LYASNVHVRR APTKVENRMV YVVAFEEDSY ARDVTRRYAK
     EYAAKVAKVQ GGSSAPNVGG GGKGRQAWWD KVVHAIERPY RLHRDDLEDQ ELDALQSMEG
     MPTTIGGFKD HPLYVLVRHL KQTETSHPPP PTTAELGKFR GESVYPRSAV VSLKTAENWM
     RNTGRTVKEG EQPLKMVKVR AGTVNRMREV EVLKDELNVA GNGEGSSAAA AGGEIMQGLY
     AFSQTEPYVP APVVDGKVPK NNFGNIDLYV PSMLPRGASH IPFKGVAKIA RKLGFDYAEA
     VTGFEFKKRR AFPVIEGVVV AAENEAIILE AFWEAEREAD EKAKLKREDR VLKQWTRLIH
     GLRIRQRLQD QYATKSTGKE HDHPQEKDGG GSRAESPHDE LADSAGGFLA GADKVVKAFH
     LPKNTHPVLP PSASGSSSPH PATLEALPPN RLSSGRRTAA ASSSRRHPKA AAEELAETSS
     DGDAAPPDFI TYDLEEEEET MDVDSDMMEE VGSLSRRRHH QHVPKTLQQM AEDAARQQEL
     DAGAEKKDDE IEEILMTSPI TAAAGGGARR TRAATIKVPL PAKLLTPNVP SSTRSTPSLA
     SGMKVKSSSK QQRSSIRRAP LRKITTKRKR TKARSESDSE DLSDQEEDEN GDEDDEVASR
     PSPSKRARGK TAATAVAPVA TPPSTRTLRP RATKTAAQVE EERQSEAAFR SAVAR
//
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