ID A0A0C3C9K2_HEBCY Unreviewed; 1075 AA.
AC A0A0C3C9K2;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Rad4 beta-hairpin domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=M413DRAFT_19059 {ECO:0000313|EMBL:KIM40899.1};
OS Hebeloma cylindrosporum h7.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hymenogastraceae; Hebeloma.
OX NCBI_TaxID=686832 {ECO:0000313|EMBL:KIM40899.1, ECO:0000313|Proteomes:UP000053424};
RN [1] {ECO:0000313|EMBL:KIM40899.1, ECO:0000313|Proteomes:UP000053424}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=h7 {ECO:0000313|Proteomes:UP000053424};
RG DOE Joint Genome Institute;
RA Kuo A., Gay G., Dore J., Kohler A., Nagy L.G., Floudas D., Copeland A.,
RA Barry K.W., Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A.,
RA Lipzen A., Lundell T., Morin E., Murat C., Sun H., Tunlid A., Henrissat B.,
RA Grigoriev I.V., Hibbett D.S., Martin F., Nordberg H.P., Cantor M.N.,
RA Hua S.X.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000053424}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=h7 {ECO:0000313|Proteomes:UP000053424};
RG DOE Joint Genome Institute;
RG Mycorrhizal Genomics Consortium;
RA Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H., Tunlid A.,
RA Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
RT "Evolutionary Origins and Diversification of the Mycorrhizal Mutualists.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
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DR EMBL; KN831781; KIM40899.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C3C9K2; -.
DR STRING; 686832.A0A0C3C9K2; -.
DR HOGENOM; CLU_003639_2_0_1; -.
DR OrthoDB; 181129at2759; -.
DR Proteomes; UP000053424; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR InterPro; IPR018327; BHD_2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR InterPro; IPR042488; Rad4_BHD3_sf.
DR InterPro; IPR002931; Transglutaminase-like.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF10404; BHD_2; 1.
DR Pfam; PF10405; BHD_3; 1.
DR Pfam; PF03835; Rad4; 1.
DR Pfam; PF01841; Transglut_core; 1.
DR SMART; SM01030; BHD_1; 1.
DR SMART; SM01031; BHD_2; 1.
DR SMART; SM01032; BHD_3; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000053424}.
FT DOMAIN 477..531
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT DOMAIN 533..611
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01031"
FT DOMAIN 618..692
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01032"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 236..323
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 732..765
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 786..847
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 889..909
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 937..1075
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..259
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 282..296
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 734..760
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 789..803
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 946..975
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 976..990
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1000..1015
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1038..1052
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1075 AA; 119037 MW; 850F58389B96E37B CRC64;
MDSEEDSDLQ DDSEDEFDWE EVDVPEHQPE HLEITLQLNP KSTKAKGITH AERLIRIDCH
KIHTIALISS ARVRNHWLND PLLHARLLSL TPLHLQNAFG MIHKSRVPDQ NQRGRMFERA
IEALNNWWSE SFFEVIPEGH IRNRTFDEIQ QKLEIRGLHV KNEYDPDATL DEEVLQDIVE
DEVETIRSSK SLMKHALMRS GSRDTSAQLF TALCRAVGIP ARLVVSVQSV PWQASVGRPK
PKYERKPKGK GKETIVPENE VEELSPSASE SLGQNGRRLD GEPVSQKSEK AKGKEKAKPV
IKLRKQKSKG NVLGAGPSRL ASPDPLTTPP VFWTEVFSRP DARWFPVDPV RGITNKRKAF
DPSPSTFNPN AAPPSTMFPQ LYASNVHVRR APTKVENRMV YVVAFEEDSY ARDVTRRYAK
EYAAKVAKVQ GGSSAPNVGG GGKGRQAWWD KVVHAIERPY RLHRDDLEDQ ELDALQSMEG
MPTTIGGFKD HPLYVLVRHL KQTETSHPPP PTTAELGKFR GESVYPRSAV VSLKTAENWM
RNTGRTVKEG EQPLKMVKVR AGTVNRMREV EVLKDELNVA GNGEGSSAAA AGGEIMQGLY
AFSQTEPYVP APVVDGKVPK NNFGNIDLYV PSMLPRGASH IPFKGVAKIA RKLGFDYAEA
VTGFEFKKRR AFPVIEGVVV AAENEAIILE AFWEAEREAD EKAKLKREDR VLKQWTRLIH
GLRIRQRLQD QYATKSTGKE HDHPQEKDGG GSRAESPHDE LADSAGGFLA GADKVVKAFH
LPKNTHPVLP PSASGSSSPH PATLEALPPN RLSSGRRTAA ASSSRRHPKA AAEELAETSS
DGDAAPPDFI TYDLEEEEET MDVDSDMMEE VGSLSRRRHH QHVPKTLQQM AEDAARQQEL
DAGAEKKDDE IEEILMTSPI TAAAGGGARR TRAATIKVPL PAKLLTPNVP SSTRSTPSLA
SGMKVKSSSK QQRSSIRRAP LRKITTKRKR TKARSESDSE DLSDQEEDEN GDEDDEVASR
PSPSKRARGK TAATAVAPVA TPPSTRTLRP RATKTAAQVE EERQSEAAFR SAVAR
//