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Database: UniProt
Entry: A0A0C4YLZ8_9BURK
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ID   A0A0C4YLZ8_9BURK        Unreviewed;      1007 AA.
AC   A0A0C4YLZ8;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   SubName: Full=Glycolate dehydrogenase, subunit GlcD {ECO:0000313|EMBL:AJG23590.1};
DE            EC=1.1.99.14 {ECO:0000313|EMBL:AJG23590.1};
GN   ORFNames=RR42_s2002 {ECO:0000313|EMBL:AJG23590.1};
OS   Cupriavidus basilensis.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Cupriavidus.
OX   NCBI_TaxID=68895 {ECO:0000313|EMBL:AJG23590.1, ECO:0000313|Proteomes:UP000031843};
RN   [1] {ECO:0000313|EMBL:AJG23590.1, ECO:0000313|Proteomes:UP000031843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=4G11 {ECO:0000313|EMBL:AJG23590.1};
RX   PubMed=25977418;
RA   Ray J., Waters R.J., Skerker J.M., Kuehl J.V., Price M.N., Huang J.,
RA   Chakraborty R., Arkin A.P., Deutschbauer A.;
RT   "Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the
RT   Oak Ridge Field Research Center Site.";
RL   Genome Announc. 3:0-0(2015).
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|ARBA:ARBA00001974};
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DR   EMBL; CP010537; AJG23590.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0C4YLZ8; -.
DR   STRING; 68895.RR42_s2002; -.
DR   KEGG; cbw:RR42_s2002; -.
DR   Proteomes; UP000031843; Chromosome secondary.
DR   GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR   GO; GO:0019154; F:glycolate dehydrogenase activity; IEA:UniProtKB-EC.
DR   GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.465.10; -; 1.
DR   Gene3D; 3.30.70.2740; -; 1.
DR   InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR   InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR   InterPro; IPR004017; Cys_rich_dom.
DR   InterPro; IPR004113; FAD-bd_oxidored_4_C.
DR   InterPro; IPR016166; FAD-bd_PCMH.
DR   InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR   InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR   InterPro; IPR016164; FAD-linked_Oxase-like_C.
DR   InterPro; IPR006094; Oxid_FAD_bind_N.
DR   PANTHER; PTHR11748; D-LACTATE DEHYDROGENASE; 1.
DR   PANTHER; PTHR11748:SF119; OXIDASE-RELATED; 1.
DR   Pfam; PF02754; CCG; 1.
DR   Pfam; PF02913; FAD-oxidase_C; 1.
DR   Pfam; PF01565; FAD_binding_4; 1.
DR   Pfam; PF13183; Fer4_8; 1.
DR   SUPFAM; SSF46548; alpha-helical ferredoxin; 1.
DR   SUPFAM; SSF56176; FAD-binding/transporter-associated domain-like; 1.
DR   SUPFAM; SSF55103; FAD-linked oxidases, C-terminal domain; 1.
DR   PROSITE; PS00198; 4FE4S_FER_1; 1.
DR   PROSITE; PS51379; 4FE4S_FER_2; 1.
DR   PROSITE; PS51387; FAD_PCMH; 1.
PE   4: Predicted;
KW   Iron {ECO:0000256|ARBA:ARBA00023004};
KW   Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Oxidoreductase {ECO:0000313|EMBL:AJG23590.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000031843}.
FT   DOMAIN          51..281
FT                   /note="FAD-binding PCMH-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51387"
FT   DOMAIN          643..674
FT                   /note="4Fe-4S ferredoxin-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51379"
SQ   SEQUENCE   1007 AA;  109606 MW;  2EDAE46CF62E3C91 CRC64;
     MLVKPIHLVP SPGRAGPALS PLSARLRKEL RGDVFFDRAT RGRYATDASI YQITPIGVVV
     PRDQADLLLA LEIARDEKAP VLARGAGTSQ CGQTVGEALV IDNSKWLNNV VDFDPVAATV
     TVEPGIVLDH LNAWLKPHGL WFPVDVSTGA QCTIGGMAGN NSCGSRSIEY GNMVHNVLGI
     DAVLADGSQC HFGTLKAPVS DARVAGILQG LQRIATRERD EIAERMPKVL RRVAGYNIDL
     FACQNPRAYT DDGYANLSHI LVGSEGTLAY SRQVTLKLSA LPRHKVLGVV NFPTFYQAMD
     MTQHIVRLKP VAVELVDRTM IDLSMENPAF RPVIESALSG EPQAILLVEF AGEEHSALLA
     QLDDLAALMS DLGLPGSVVK MADAKSQKAL WDVRKAGLNI MMSMKGDGKP VSFIEDCAVP
     LEHLAEYTRR LTAVFHKHET EGTWYAHASV GTLHVRPILD MRRDGAERMR EIAEEAAELV
     REYKGAYSGE HGDGLCRGEW VAWQYGPRIN AAFGEIKALF DPDNRFNPDK IVRPPRMDAR
     ENFRFAPGYA ALPLTPALDW SAWNVSRNPL TGEETAPGTG TDRAGGLAAA VEMCNNNGHC
     RKFDAGTMCP SYRVTKDEQH VTRGRANTLR LAVSGQLGDD GLASPEVKEA LDLCVACKGC
     KRDCPTGVDM ARFKIEARHA WARRHGITLR ERMVAFMPRY ASVASRLAAL LALADGIPGI
     SGVVKRAMGF APQRSLPRFK AAFLSKAKAM RQGGEGREVM LFVDTFSNYM EPENALAAQQ
     VLEAAGYTVH FNRREGERPL CCGRTFLAAG LVDQAREEAR RLLDAVKPYV DRDIPIVGLE
     PSCLLSLRDE FLSYGYGDDA RKLAAQAFLF EEFLVREKAA GRLALDLDAL QTSEAVVHGH
     CHQKAFDAFT PVQTVLGWIP GLKVSPVESS CCGMAGSFGY EAEHYEASKA MAELALLPAV
     RKRAANAIVV ADGTSCRHQI LDGADTEAMH VARVLAMALK RQGGPQA
//
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