ID A0A0C4YLZ8_9BURK Unreviewed; 1007 AA.
AC A0A0C4YLZ8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=Glycolate dehydrogenase, subunit GlcD {ECO:0000313|EMBL:AJG23590.1};
DE EC=1.1.99.14 {ECO:0000313|EMBL:AJG23590.1};
GN ORFNames=RR42_s2002 {ECO:0000313|EMBL:AJG23590.1};
OS Cupriavidus basilensis.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Cupriavidus.
OX NCBI_TaxID=68895 {ECO:0000313|EMBL:AJG23590.1, ECO:0000313|Proteomes:UP000031843};
RN [1] {ECO:0000313|EMBL:AJG23590.1, ECO:0000313|Proteomes:UP000031843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=4G11 {ECO:0000313|EMBL:AJG23590.1};
RX PubMed=25977418;
RA Ray J., Waters R.J., Skerker J.M., Kuehl J.V., Price M.N., Huang J.,
RA Chakraborty R., Arkin A.P., Deutschbauer A.;
RT "Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the
RT Oak Ridge Field Research Center Site.";
RL Genome Announc. 3:0-0(2015).
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|ARBA:ARBA00001974};
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DR EMBL; CP010537; AJG23590.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C4YLZ8; -.
DR STRING; 68895.RR42_s2002; -.
DR KEGG; cbw:RR42_s2002; -.
DR Proteomes; UP000031843; Chromosome secondary.
DR GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR GO; GO:0019154; F:glycolate dehydrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.465.10; -; 1.
DR Gene3D; 3.30.70.2740; -; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR004017; Cys_rich_dom.
DR InterPro; IPR004113; FAD-bd_oxidored_4_C.
DR InterPro; IPR016166; FAD-bd_PCMH.
DR InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR InterPro; IPR016164; FAD-linked_Oxase-like_C.
DR InterPro; IPR006094; Oxid_FAD_bind_N.
DR PANTHER; PTHR11748; D-LACTATE DEHYDROGENASE; 1.
DR PANTHER; PTHR11748:SF119; OXIDASE-RELATED; 1.
DR Pfam; PF02754; CCG; 1.
DR Pfam; PF02913; FAD-oxidase_C; 1.
DR Pfam; PF01565; FAD_binding_4; 1.
DR Pfam; PF13183; Fer4_8; 1.
DR SUPFAM; SSF46548; alpha-helical ferredoxin; 1.
DR SUPFAM; SSF56176; FAD-binding/transporter-associated domain-like; 1.
DR SUPFAM; SSF55103; FAD-linked oxidases, C-terminal domain; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
DR PROSITE; PS51387; FAD_PCMH; 1.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Oxidoreductase {ECO:0000313|EMBL:AJG23590.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000031843}.
FT DOMAIN 51..281
FT /note="FAD-binding PCMH-type"
FT /evidence="ECO:0000259|PROSITE:PS51387"
FT DOMAIN 643..674
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 1007 AA; 109606 MW; 2EDAE46CF62E3C91 CRC64;
MLVKPIHLVP SPGRAGPALS PLSARLRKEL RGDVFFDRAT RGRYATDASI YQITPIGVVV
PRDQADLLLA LEIARDEKAP VLARGAGTSQ CGQTVGEALV IDNSKWLNNV VDFDPVAATV
TVEPGIVLDH LNAWLKPHGL WFPVDVSTGA QCTIGGMAGN NSCGSRSIEY GNMVHNVLGI
DAVLADGSQC HFGTLKAPVS DARVAGILQG LQRIATRERD EIAERMPKVL RRVAGYNIDL
FACQNPRAYT DDGYANLSHI LVGSEGTLAY SRQVTLKLSA LPRHKVLGVV NFPTFYQAMD
MTQHIVRLKP VAVELVDRTM IDLSMENPAF RPVIESALSG EPQAILLVEF AGEEHSALLA
QLDDLAALMS DLGLPGSVVK MADAKSQKAL WDVRKAGLNI MMSMKGDGKP VSFIEDCAVP
LEHLAEYTRR LTAVFHKHET EGTWYAHASV GTLHVRPILD MRRDGAERMR EIAEEAAELV
REYKGAYSGE HGDGLCRGEW VAWQYGPRIN AAFGEIKALF DPDNRFNPDK IVRPPRMDAR
ENFRFAPGYA ALPLTPALDW SAWNVSRNPL TGEETAPGTG TDRAGGLAAA VEMCNNNGHC
RKFDAGTMCP SYRVTKDEQH VTRGRANTLR LAVSGQLGDD GLASPEVKEA LDLCVACKGC
KRDCPTGVDM ARFKIEARHA WARRHGITLR ERMVAFMPRY ASVASRLAAL LALADGIPGI
SGVVKRAMGF APQRSLPRFK AAFLSKAKAM RQGGEGREVM LFVDTFSNYM EPENALAAQQ
VLEAAGYTVH FNRREGERPL CCGRTFLAAG LVDQAREEAR RLLDAVKPYV DRDIPIVGLE
PSCLLSLRDE FLSYGYGDDA RKLAAQAFLF EEFLVREKAA GRLALDLDAL QTSEAVVHGH
CHQKAFDAFT PVQTVLGWIP GLKVSPVESS CCGMAGSFGY EAEHYEASKA MAELALLPAV
RKRAANAIVV ADGTSCRHQI LDGADTEAMH VARVLAMALK RQGGPQA
//