ID A0A0C9M9F1_9FUNG Unreviewed; 1260 AA.
AC A0A0C9M9F1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 1-like {ECO:0000313|EMBL:GAN03854.1};
GN ORFNames=MAM1_0049c03309 {ECO:0000313|EMBL:GAN03854.1};
OS Mucor ambiguus.
OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina;
OC Mucoromycetes; Mucorales; Mucorineae; Mucoraceae; Mucor.
OX NCBI_TaxID=91626 {ECO:0000313|EMBL:GAN03854.1};
RN [1] {ECO:0000313|EMBL:GAN03854.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NBRC 6742 {ECO:0000313|EMBL:GAN03854.1};
RA Takeda I., Yamane N., Morita T., Tamano K., Machida M., Baker S., Koike H.;
RT "Draft genome sequence of an oleaginous Mucoromycotina fungus Mucor
RT ambiguus NBRC6742.";
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DF836338; GAN03854.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C9M9F1; -.
DR STRING; 91626.A0A0C9M9F1; -.
DR OrthoDB; 1367334at2759; -.
DR Proteomes; UP000053815; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd00024; CD_CSD; 1.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF08284; RVP_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000053815};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 327..507
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 887..1055
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 1193..1253
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1239..1260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1260 AA; 144809 MW; 4189AD9E8017C7F8 CRC64;
MPVNVNSTDC QQVSNNNEHI IVDIIIKLTD SRQFNTFALI DSGSMENFCD INFAAKHNLP
LMEKSAPVEI LTVDGSPISS GKVTQESTVQ MSMGSHTERI KFSITKLGQY PVILGIPWLK
KHDPRITWST NAIAFDSNTC VHSCFEICHT IKALPMHPKF SRPTAINLSL FDQTPVGNDI
DCINKSESFD AYPDLSSTCD NFPNIDIQFV SYSSIKKDLT DDNSCYITPS EVIRIAEYPT
SHYIAATSSS TSNSELTATK EDYSNVPDKY SAFYEVFSKK KANTLPPHRP YDHQIILQEG
KKPPFGPIYS LSQVELDELA KYLKENLANG FISRSTSPAA APILFVKKKS GELRLCIDNR
GLNAVTVRDP PVLPLVSEMI DRLGNAFYYT KLDVRNAYYR IRIKQGQEWL TGFRCKYGHF
QYNVLNFGLV NAPSTWMAYL NDVLREHIDQ TAVFFYDDIL VFTNGNLDQH TKDVKAILQK
LLDAKLYIKA EKCEFDKTEV DFLGIRIDRN GVSMDNEKIK AIIEWPTPKS QHDIQVFLGF
ANYHRAFLKH YSKYTTPLTN LLQKGKNFKW EEKEEIAFNA LKSLFTSKPV LKIFSPDRPC
IMETDASDFA IGSVLSQYDD NNVLHPIAYF SRKLKAAEIN YEIYDKEMLA ITDSFVHWRH
YLQDTPHKTL VLTDHRNLEY FLDAKKLNRR QARYAIKLID YNFVIQYRSA TQNQRADALS
RRPDFEPDEY EKQPIQALLK PDQLRLSAAQ VTNCDISMDV DLQKRLLDCQ KHDPAYNIVT
HKDKLKQSTA SRYLNYSIDE STGLLLKNSL VYVPNNDDIK LELLRIHHDN ISSGHFGRAK
TIELLSRNYW WKGMTNFVNR YVANCQICIR GKPSRQAPQG PLRSLQIPDQ PWESISMDFI
VKLPKSKGFD SIFVVVDRLT KMAHFIPCNE SMSAKELATL FINNIFRLHG FPTSIVSDRG
ALFTSKFWQH LLKSLDVKAN MSTAYRPETD GQTERTNSTL EQYLRMYCNY QQNNWSQLLS
TAEFSYNNHC QSSTKFSPFF ANYGYHPKAN VVIKKRGSEY VPASEEFLVQ LKQTQDESKT
NIAKAQTSQA LYYNQGKRQI QDLKIGDKVY INSKNITTTR PMKKLDHKRL GPFKIVEKFS
SHAYKLDLPT SMKIHPTFHI SKLTPRTIKG LSDIGNRELP PLPPIIVNSN EEYEVDQILD
SRIYRKKLQY KVKWKGYEDP SEDTWEDQGN LENAQLVIKQ FHQDYPHKPS PSSTKDRPRT
//
