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Database: UniProt
Entry: A0A0D0LF65_VARPD
LinkDB: A0A0D0LF65_VARPD
Original site: A0A0D0LF65_VARPD 
ID   A0A0D0LF65_VARPD        Unreviewed;        70 AA.
AC   A0A0D0LF65;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   03-JUL-2019, entry version 40.
DE   RecName: Full=30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667};
GN   Name=rpsU {ECO:0000256|HAMAP-Rule:MF_00358,
GN   ECO:0000313|EMBL:KLN54325.1};
GN   ORFNames=APR47_11585 {ECO:0000313|EMBL:KPV36639.1}, APR48_13760
GN   {ECO:0000313|EMBL:KPV32362.1}, APR49_14865
GN   {ECO:0000313|EMBL:KPV08600.1}, APR50_16005
GN   {ECO:0000313|EMBL:KPV06655.1}, APR51_11625
GN   {ECO:0000313|EMBL:KPV22047.1}, APR52_29730
GN   {ECO:0000313|EMBL:KPU92021.1}, DI563_10955
GN   {ECO:0000313|EMBL:PZQ74941.1}, DI587_27520
GN   {ECO:0000313|EMBL:PZQ04295.1}, RT97_01255
GN   {ECO:0000313|EMBL:KIQ36802.1}, VPARA_44690
GN   {ECO:0000313|EMBL:KLN54325.1};
OS   Variovorax paradoxus.
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=34073 {ECO:0000313|EMBL:KIQ36802.1, ECO:0000313|Proteomes:UP000032067};
RN   [1] {ECO:0000313|EMBL:KIQ36802.1, ECO:0000313|Proteomes:UP000032067}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MEDvA23 {ECO:0000313|EMBL:KIQ36802.1,
RC   ECO:0000313|Proteomes:UP000032067};
RA   Perisin M.A., Vetter M., Gilbert J.A., Bergelson J.;
RT   "16Stimator: statistical estimation of ribosomal gene copy numbers
RT   from draft genome assemblies.";
RL   Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KLN54325.1, ECO:0000313|Proteomes:UP000035170}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TBEA6 {ECO:0000313|EMBL:KLN54325.1,
RC   ECO:0000313|Proteomes:UP000035170};
RA   Poehlein A., Schuldes J., Wuebbeler J.H., Hiessl S., Steinbuechel A.,
RA   Daniel R.;
RT   "Genome sequence of Variovorax paradoxus TBEA6.";
RL   Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|Proteomes:UP000050323, ECO:0000313|Proteomes:UP000050449, ECO:0000313|Proteomes:UP000050458}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=H061 {ECO:0000313|EMBL:KPU92021.1,
RC   ECO:0000313|Proteomes:UP000050458}, H084 {ECO:0000313|EMBL:KPV08600.1,
RC   ECO:0000313|Proteomes:UP000050534}, H090 {ECO:0000313|EMBL:KPV06655.1,
RC   ECO:0000313|Proteomes:UP000050504}, H095 {ECO:0000313|EMBL:KPV22047.1,
RC   ECO:0000313|Proteomes:UP000050323}, H108 {ECO:0000313|EMBL:KPV36639.1,
RC   ECO:0000313|Proteomes:UP000050466}, and H112
RC   {ECO:0000313|EMBL:KPV32362.1, ECO:0000313|Proteomes:UP000050449};
RA   Gomez-Alvarez V., Revetta R.P.;
RT   "Genome Sequences of Variovorax paradoxus Isolates, Recuperated from a
RT   Chloraminated Drinking Water Distribution System Simulator Subjected
RT   to Episodes of Nitrification.";
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:PZQ04295.1, ECO:0000313|Proteomes:UP000248537, ECO:0000313|Proteomes:UP000249135}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S2_005_003_R2_41 {ECO:0000313|EMBL:PZQ74941.1}, and
RC   S2_006_000_R2_65 {ECO:0000313|EMBL:PZQ04295.1};
RA   Brooks B., Olm M.R., Firek B.A., Baker R., Thomas B.C., Morowitz M.J.,
RA   Banfield J.F.;
RT   "Infants hospitalized years apart are colonized by the same room-
RT   sourced microbial strains.";
RL   Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS21
CC       family. {ECO:0000256|HAMAP-Rule:MF_00358,
CC       ECO:0000256|RuleBase:RU000667, ECO:0000256|SAAS:SAAS00814559}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KIQ36802.1}.
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DR   EMBL; JXQQ01000005; KIQ36802.1; -; Genomic_DNA.
DR   EMBL; JZWI01000024; KLN54325.1; -; Genomic_DNA.
DR   EMBL; LKTU01000048; KPU92021.1; -; Genomic_DNA.
DR   EMBL; LKTW01000032; KPV06655.1; -; Genomic_DNA.
DR   EMBL; LKTV01000029; KPV08600.1; -; Genomic_DNA.
DR   EMBL; LKTX01000022; KPV22047.1; -; Genomic_DNA.
DR   EMBL; LKTZ01000026; KPV32362.1; -; Genomic_DNA.
DR   EMBL; LKTY01000022; KPV36639.1; -; Genomic_DNA.
DR   EMBL; QFOS01000041; PZQ04295.1; -; Genomic_DNA.
DR   EMBL; QFPP01000107; PZQ74941.1; -; Genomic_DNA.
DR   RefSeq; WP_007833691.1; NZ_LVHG01000027.1.
DR   SMR; A0A0D0LF65; -.
DR   STRING; 1157708.KB907450_gene6579; -.
DR   EnsemblBacteria; KIQ36802; KIQ36802; RT97_01255.
DR   EnsemblBacteria; KLN54325; KLN54325; VPARA_44690.
DR   EnsemblBacteria; KPU92021; KPU92021; APR52_29730.
DR   EnsemblBacteria; KPV06655; KPV06655; APR50_16005.
DR   EnsemblBacteria; KPV08600; KPV08600; APR49_14865.
DR   EnsemblBacteria; KPV22047; KPV22047; APR51_11625.
DR   EnsemblBacteria; KPV32362; KPV32362; APR48_13760.
DR   EnsemblBacteria; KPV36639; KPV36639; APR47_11585.
DR   EnsemblBacteria; OAK65953; OAK65953; A3K87_09230.
DR   GeneID; 34235943; -.
DR   PATRIC; fig|34073.19.peg.4570; -.
DR   eggNOG; ENOG4105VCC; Bacteria.
DR   eggNOG; COG0828; LUCA.
DR   Proteomes; UP000032067; Unassembled WGS sequence.
DR   Proteomes; UP000035170; Unassembled WGS sequence.
DR   Proteomes; UP000050323; Unassembled WGS sequence.
DR   Proteomes; UP000050449; Unassembled WGS sequence.
DR   Proteomes; UP000050458; Unassembled WGS sequence.
DR   Proteomes; UP000050466; Unassembled WGS sequence.
DR   Proteomes; UP000050504; Unassembled WGS sequence.
DR   Proteomes; UP000050534; Unassembled WGS sequence.
DR   Proteomes; UP000248537; Unassembled WGS sequence.
DR   Proteomes; UP000249135; Unassembled WGS sequence.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.20.5.1150; -; 1.
DR   HAMAP; MF_00358; Ribosomal_S21; 1.
DR   InterPro; IPR001911; Ribosomal_S21.
DR   InterPro; IPR018278; Ribosomal_S21_CS.
DR   InterPro; IPR038380; S21_sf.
DR   PANTHER; PTHR21109; PTHR21109; 1.
DR   Pfam; PF01165; Ribosomal_S21; 1.
DR   PRINTS; PR00976; RIBOSOMALS21.
DR   TIGRFAMs; TIGR00030; S21p; 1.
DR   PROSITE; PS01181; RIBOSOMAL_S21; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000032067,
KW   ECO:0000313|Proteomes:UP000035170, ECO:0000313|Proteomes:UP000050323,
KW   ECO:0000313|Proteomes:UP000050449};
KW   Reference proteome {ECO:0000313|Proteomes:UP000035170};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_00358,
KW   ECO:0000256|RuleBase:RU000667, ECO:0000256|SAAS:SAAS00472975};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_00358,
KW   ECO:0000256|RuleBase:RU000667, ECO:0000256|SAAS:SAAS00472968,
KW   ECO:0000313|EMBL:KIQ36802.1}.
SQ   SEQUENCE   70 AA;  8506 MW;  E609B9C71BA6089E CRC64;
     MTTIRVKENE PFDVALRRFK RTIEKLGLLT DLRAREFYEK PTAERKRKKA AAVKRHYKRV
     RSMQLPKKLY
//
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