ID A0A0D0LHA6_9FLAO Unreviewed; 251 AA.
AC A0A0D0LHA6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KIQ18074.1};
GN ORFNames=RT99_18655 {ECO:0000313|EMBL:KIQ18074.1};
OS Flavobacterium sp. MEB061.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1587524 {ECO:0000313|EMBL:KIQ18074.1, ECO:0000313|Proteomes:UP000032091};
RN [1] {ECO:0000313|EMBL:KIQ18074.1, ECO:0000313|Proteomes:UP000032091}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MEB061 {ECO:0000313|EMBL:KIQ18074.1,
RC ECO:0000313|Proteomes:UP000032091};
RA Perisin M.A., Vetter M., Gilbert J.A., Bergelson J.;
RT "16Stimator: statistical estimation of ribosomal gene copy numbers from
RT draft genome assemblies.";
RL Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + ATP = 4-
CC amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + ADP;
CC Xref=Rhea:RHEA:19893, ChEBI:CHEBI:30616, ChEBI:CHEBI:57841,
CC ChEBI:CHEBI:58354, ChEBI:CHEBI:456216; EC=2.7.4.7;
CC Evidence={ECO:0000256|ARBA:ARBA00000565};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-
CC methyl-5-(phosphooxymethyl)pyrimidine + ADP + H(+);
CC Xref=Rhea:RHEA:23096, ChEBI:CHEBI:15378, ChEBI:CHEBI:16892,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58354, ChEBI:CHEBI:456216;
CC EC=2.7.1.49; Evidence={ECO:0000256|ARBA:ARBA00000151};
CC -!- PATHWAY: Cofactor biosynthesis; thiamine diphosphate biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004948}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KIQ18074.1}.
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DR EMBL; JXQR01000045; KIQ18074.1; -; Genomic_DNA.
DR RefSeq; WP_042566248.1; NZ_JXQR01000045.1.
DR AlphaFoldDB; A0A0D0LHA6; -.
DR OrthoDB; 9810880at2; -.
DR Proteomes; UP000032091; Unassembled WGS sequence.
DR GO; GO:0008972; F:phosphomethylpyrimidine kinase activity; IEA:InterPro.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR GO; GO:0009228; P:thiamine biosynthetic process; IEA:InterPro.
DR CDD; cd01169; HMPP_kinase; 1.
DR Gene3D; 3.40.1190.20; -; 1.
DR InterPro; IPR004399; HMP/HMP-P_kinase_dom.
DR InterPro; IPR013749; PM/HMP-P_kinase-1.
DR InterPro; IPR029056; Ribokinase-like.
DR PANTHER; PTHR20858:SF17; HYDROXYMETHYLPYRIMIDINE_PHOSPHOMETHYLPYRIMIDINE KINASE THI20-RELATED; 1.
DR PANTHER; PTHR20858; PHOSPHOMETHYLPYRIMIDINE KINASE; 1.
DR Pfam; PF08543; Phos_pyr_kin; 1.
DR SUPFAM; SSF53613; Ribokinase-like; 1.
PE 4: Predicted;
KW Kinase {ECO:0000313|EMBL:KIQ18074.1};
KW Transferase {ECO:0000313|EMBL:KIQ18074.1}.
FT DOMAIN 15..245
FT /note="Pyridoxamine kinase/Phosphomethylpyrimidine kinase"
FT /evidence="ECO:0000259|Pfam:PF08543"
SQ SEQUENCE 251 AA; 28036 MW; A7BF7ECF263269E0 CRC64;
MSANRPFILS IAGFDPSGGA GVLADIKTFE QHSLTGLAII TANTIQTENE FFDIQWIDLS
YVIRSVETLF ERYKINAVKI GIVPSLHYLN RILSTIKLLS PSTQIVWDPV LKSTTKFEFM
SIKDRLDLNK IVSKIDLITP NYNEIELLFP DFIQHQLRMQ NEVSSAILLK GGHNPLAIGT
DRLFLKDEII DLLPSEKKCS EKHGSGCVLS AAIASNLALD QTLQEACKNA KTYIEKYLSS
TSTLTGYHYV P
//