ID A0A0D2DU77_9EURO Unreviewed; 2234 AA.
AC A0A0D2DU77;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=DNA polymerase epsilon catalytic subunit {ECO:0000256|RuleBase:RU365029};
DE EC=2.7.7.7 {ECO:0000256|RuleBase:RU365029};
GN ORFNames=PV06_08965 {ECO:0000313|EMBL:KIW39164.1};
OS Exophiala oligosperma.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.
OX NCBI_TaxID=215243 {ECO:0000313|EMBL:KIW39164.1, ECO:0000313|Proteomes:UP000053342};
RN [1] {ECO:0000313|EMBL:KIW39164.1, ECO:0000313|Proteomes:UP000053342}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 72588 {ECO:0000313|EMBL:KIW39164.1,
RC ECO:0000313|Proteomes:UP000053342};
RG The Broad Institute Genomics Platform;
RA Cuomo C., de Hoog S., Gorbushina A., Stielow B., Teixiera M.,
RA Abouelleil A., Chapman S.B., Priest M., Young S.K., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Exophiala oligosperma CBS72588.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA polymerase II participates in chromosomal DNA
CC replication. {ECO:0000256|RuleBase:RU365029}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC Evidence={ECO:0000256|RuleBase:RU365029};
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966,
CC ECO:0000256|RuleBase:RU365029};
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU365029}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family.
CC {ECO:0000256|ARBA:ARBA00005755, ECO:0000256|RuleBase:RU365029}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KN847340; KIW39164.1; -; Genomic_DNA.
DR RefSeq; XP_016259380.1; XM_016410358.1.
DR STRING; 215243.A0A0D2DU77; -.
DR GeneID; 27361039; -.
DR VEuPathDB; FungiDB:PV06_08965; -.
DR HOGENOM; CLU_000556_0_1_1; -.
DR OrthoDB; 5475218at2759; -.
DR Proteomes; UP000053342; Unassembled WGS sequence.
DR GO; GO:0008622; C:epsilon DNA polymerase complex; IEA:InterPro.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd05779; DNA_polB_epsilon_exo; 1.
DR CDD; cd05535; POLBc_epsilon; 1.
DR Gene3D; 1.10.132.60; DNA polymerase family B, C-terminal domain; 1.
DR Gene3D; 3.30.342.10; DNA Polymerase, chain B, domain 1; 1.
DR Gene3D; 3.90.1600.10; Palm domain of DNA polymerase; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR013697; DNA_pol_e_suA_C.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR029703; POL2.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR10670:SF0; DNA POLYMERASE EPSILON CATALYTIC SUBUNIT 1; 1.
DR PANTHER; PTHR10670; DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A; 1.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR Pfam; PF08490; DUF1744; 1.
DR SMART; SM01159; DUF1744; 1.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485, ECO:0000256|RuleBase:RU365029};
KW DNA replication {ECO:0000256|RuleBase:RU365029};
KW DNA-binding {ECO:0000256|RuleBase:RU365029};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932,
KW ECO:0000256|RuleBase:RU365029};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|RuleBase:RU365029};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014, ECO:0000256|RuleBase:RU365029};
KW Metal-binding {ECO:0000256|RuleBase:RU365029};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW ECO:0000256|RuleBase:RU365029};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365029};
KW Reference proteome {ECO:0000313|Proteomes:UP000053342};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU365029};
KW Zinc {ECO:0000256|RuleBase:RU365029};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|RuleBase:RU365029}.
FT DOMAIN 1516..1907
FT /note="DNA polymerase epsilon catalytic subunit A C-
FT terminal"
FT /evidence="ECO:0000259|SMART:SM01159"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1229..1248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..27
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2234 AA; 254832 MW; 0BB40F87CFA28747 CRC64;
MPVRKPSRYG SNVRFSKASS RNQRTKTIDS ASLRDTEATS QDEKFQAIRL ANSIDESMGF
PRYDSGKRRV GWLYNMHSTV IEDPKVPGGR AGVDFYFIGE DEENFKATVE YDPYFLLAVK
RGREAEVEEW CKRMFEGLVK SVARVTKEDL KMPNHLLGYK RTFLRLNFAN VTDLLAVRKS
VLPIAEKNKE KVNAMDTYAE VASATAGFDV YDEEQLNDIH TNGIAEASDF IVDIREYDVP
YHVRVTIDED IRLGKWYTVD AKHGSVKLTC LEDRLQRADP VVLAFDIETT KLPLKFPDSL
IDQIMMISYM IDGQGFLITN REIVSEDISD FDYTPKEEYE GPFMIFNEPN ERALIERFFS
HIKEARPNVI ATYNGDFFDW PFVEARASVL GIDMYAEIGF RKNSEDIYQS DYCAHLDCFA
WVNRDSYLPQ GSRGLKAVTV AKLGYDPDEL DPELMTPYAN EHPQILAEYS VSDAVATYYL
YMKYVHPFIF SLCTILPLNP DDTLRKGTGT LCEMLLMVQA YHKNIVLPNK HKEPREAFWE
GHLLESETYV GGHVESIEAG VFRADIPVNF AIDPAAIDEL LRDLDAALKF CITVEEKKNL
DDITNYDEVR AQISEKLNSL KTTPHRNERP LIYHLDVASM YPNIMTTNRL QPDSMISESD
CAACDFNRPG KTCDRRLPWA WRGEFLPTKR DEYNMIRRAM VNETFPGKHA KSMRRTFQEL
SLDEQASAVR NRLQEYSKKI YHKIHDSKTI EREAIICQRE NPFYVDTVRD FRDRRYDFKG
KQKVWKGKTE ALKSSGASAT EIEEAKKMIV LFDSLQLAHK VILNSFYGYV MRKGSRWYSL
EMAGVTCLTG AHIIQMAREL VERIGRPLEL DTDGIWCMLP ATFPENVVFT LKNGKKMAVS
YPCVMLNHLV HASYTNHQYQ TLTDPTIFKY ETHSDNSIFF EVDGPYKAMI LPTSKEEDKN
LKKRYAVFNH DGSLAELKGF EVKRRGELKL IKIFQTQIFK FFLEGTTLAE TYAAVARVAN
RWLDVLHQHG STLADEELID LICENKSMTK TLEEYGAQKS TSITTAKRLA EFLGEQMIKD
KGLNCKYIIS AKPRNTPVTE RAIPVAIFSA DENVKRFFLR KWLKEDPGDM DPRTVIDWDY
YLERLGSVIQ KLISIPAALQ KIRNPVPRVA HPEWLQKRIT AKDDKFKQKK MSDLFEKKPL
GERSVNLLDH RLPPTGDIED ALDAEFKTPV QLTKQSKRKS PDTTNQTVID PYATLPADAP
AADEDYSGWL QHQKQKWKIQ KQARARRRQL FGEKPNSAMD SIGSFFRNQA EMLYINTWQI
LQLRQGESPG EVKAFVLIGK KIHPLDIKVQ RTLYLNLKGE ELPNVEIPGC EVEKVNHALP
NGHPSIHLFQ LSMSEDTYLR EAESVSLLCN HPSVEGVYER QLPLFMRAML KLGNMCSFDE
SQKGVLGKGL EQGFDLSSLL RSNSHSTYLE DLSAFGYVYF YHITSGDRTV FALFSSSRSE
AHIIILSRTR DAQLPNADKI YAEQYRQKTA EEALVDSVLE YQASLHFKVS QVTTRRKAHL
ELGEILKKWR SEESKPTVIL MQSTSSKQLS HDIRIVRDYP ILSLPSEHAD VDLPPLGWQA
HAFKQLISHY LSAAGWLAHL TELARYGDVP LCNLEKDDPR FLIDLAYARR LKRSNVVLWW
SEQPRPDHAG HERDDIIGPL TEVVEMPSIN NPGAYTSVCV DVSVQNLAIN TLLTSSIIND
LEGSADSVAF NPAADDELSG GGISRSNGGF AQAALDVLRD MVKSWWAEAC QGNRLADVMV
QHLVRWVEAP ASCLYDRHLH YYVQMMSKKA MQQLITDFRR VGSHVVFASP TRLLLQTSKQ
EVENAYAYSQ YILKSIKQKP LFHFLGLGVK DYWDVLVWYD AYNYGGKGTS AITEQTNTSN
LETVVHWQLS QFLPLSLQPV FEDWVITFIE VMQNLKRPTI ESGDSSTPRA TQLPSAFISL
TEDPTSTEVT TVLQDDFSKP LKKQINALIR RQREELLHPE LASDWSFPNL PGGTLESTDA
RHPRDPVLEL VKSLMQIVSL SKPLQLEARL LRKELLTLFD VREFGQEARF ENPSASLRFD
NLVCDTCTMT RDLDLCRDED VLPDEQAGAN RPWTCLACQS EFSKIALEET LIARVQASLL
GWQVQDLKCK KCGTLQGDDA VFSDHCACGG EWVGVLDRRE IRKKVNVLER VSSAYGLRML
ASVVEGVKAM CLMS
//