ID A0A0D2J9A3_9CHLO Unreviewed; 672 AA.
AC A0A0D2J9A3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=5'-3' exoribonuclease 1 {ECO:0000313|EMBL:KIY96312.1};
DE EC=3.1.13.- {ECO:0000313|EMBL:KIY96312.1};
GN ORFNames=MNEG_11650 {ECO:0000313|EMBL:KIY96312.1};
OS Monoraphidium neglectum.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Monoraphidium.
OX NCBI_TaxID=145388 {ECO:0000313|EMBL:KIY96312.1, ECO:0000313|Proteomes:UP000054498};
RN [1] {ECO:0000313|EMBL:KIY96312.1, ECO:0000313|Proteomes:UP000054498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SAG 48.87 {ECO:0000313|EMBL:KIY96312.1,
RC ECO:0000313|Proteomes:UP000054498};
RX PubMed=24373495; DOI=10.1186/1471-2164-14-926;
RA Bogen C., Al-Dilaimi A., Albersmeier A., Wichmann J., Grundmann M.,
RA Rupp O., Lauersen K.J., Blifernez-Klassen O., Kalinowski J., Goesmann A.,
RA Mussgnug J.H., Kruse O.;
RT "Reconstruction of the lipid metabolism for the microalga Monoraphidium
RT neglectum from its genome sequence reveals characteristics suitable for
RT biofuel production.";
RL BMC Genomics 14:926-926(2013).
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DR EMBL; KK103065; KIY96312.1; -; Genomic_DNA.
DR RefSeq; XP_013895332.1; XM_014039878.1.
DR AlphaFoldDB; A0A0D2J9A3; -.
DR STRING; 145388.A0A0D2J9A3; -.
DR GeneID; 25728934; -.
DR KEGG; mng:MNEG_11650; -.
DR OrthoDB; 167745at2759; -.
DR Proteomes; UP000054498; Unassembled WGS sequence.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.1050; -; 1.
DR Gene3D; 2.170.260.40; -; 1.
DR InterPro; IPR027073; 5_3_exoribonuclease.
DR InterPro; IPR040992; XRN1_D1.
DR InterPro; IPR047007; XRN1_D1_sf.
DR InterPro; IPR041106; XRN1_D2_D3.
DR InterPro; IPR041412; Xrn1_helical.
DR PANTHER; PTHR12341:SF41; 5'-3' EXORIBONUCLEASE 1; 1.
DR PANTHER; PTHR12341; 5'->3' EXORIBONUCLEASE; 1.
DR Pfam; PF18332; XRN1_D1; 1.
DR Pfam; PF18334; XRN1_D2_D3; 1.
DR Pfam; PF17846; XRN_M; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:KIY96312.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000054498}.
FT DOMAIN 2..119
FT /note="Xrn1 helical"
FT /evidence="ECO:0000259|Pfam:PF17846"
FT DOMAIN 165..331
FT /note="5'-3' exoribonuclease 1 D1"
FT /evidence="ECO:0000259|Pfam:PF18332"
FT DOMAIN 431..582
FT /note="Exoribonuclease Xrn1 D2/D3"
FT /evidence="ECO:0000259|Pfam:PF18334"
SQ SEQUENCE 672 AA; 72837 MW; A2DB55AC20DD1A05 CRC64;
MASELRDLND IRVSFTPGKP FYPYEQLLAV QPASSCTLLP EPYQYLMTSP TSPIRDFYPV
KFDIDMEGKR AEWEGIVKIP FISEDRLLAA ARSVKQEALT SEERRRNAHG DVLVFQHVAG
RHEAEHCEST LPRWGATVHH AHSSCRHVPP PPPLPPAQLG FRPALVKGTL TGKKNPPGFP
TLKTMKLVGA ELKMAGVTVF GNPSKKESLI LTLPDIHQVL GESTDASAVS SMIGERVYVK
WPYLQEAQIV RVSDKSQDLS ATGARQMPKE EADNWANLSS RTRNVFLTKQ GVETGPLPVM
LHVKACTGYV RHADGSVVKR YKDEEAPYPL QARTPPRPHP LAAPGAAGAA FLARRRGAVL
RQRPRPPAGF HDPDEPRPID LQEGVRVLFL GQEHYGCVAT LLPDPGRGVD AHGRRLLGLS
AGGAPGARAC VRVAPARHDA AGAAKRGRQV VREYPIQYMP SGVAARALRV NPRLLGRVTG
NVWVGDGDNR VDVGLAVKNA KQGLCVPGLA APLHDDSGWA YSQPLLDLVA EYRRRFPWVL
STLESSSEHR LTAEMLVPAS VAATASERSA KLSEVTSWLK GLPTAKRPLV KTGVQIASDK
ALEILLATMP PLLPRGAGSF LPVDYENVAA PLLLPPYDPS RPLSALLGGQ LEHTAKIGLP
VPGTPVCQSP SQ
//
