GenomeNet

Database: UniProt
Entry: A0A0D2LVZ3_GOSRA
LinkDB: A0A0D2LVZ3_GOSRA
Original site: A0A0D2LVZ3_GOSRA 
ID   A0A0D2LVZ3_GOSRA        Unreviewed;       912 AA.
AC   A0A0D2LVZ3;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 39.
DE   RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN   ORFNames=B456_001G077600 {ECO:0000313|EMBL:KJB08332.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB08332.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB08332.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA   Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA   Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA   Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA   Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA   Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA   ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA   Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA   Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA   Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; CM001740; KJB08331.1; -; Genomic_DNA.
DR   EMBL; CM001740; KJB08332.1; -; Genomic_DNA.
DR   RefSeq; XP_012470367.1; XM_012614913.1.
DR   RefSeq; XP_012470372.1; XM_012614918.1.
DR   AlphaFoldDB; A0A0D2LVZ3; -.
DR   STRING; 29730.A0A0D2LVZ3; -.
DR   EnsemblPlants; KJB08331; KJB08331; B456_001G077600.
DR   EnsemblPlants; KJB08332; KJB08332; B456_001G077600.
DR   GeneID; 105788156; -.
DR   Gramene; KJB08331; KJB08331; B456_001G077600.
DR   Gramene; KJB08332; KJB08332; B456_001G077600.
DR   KEGG; gra:105788156; -.
DR   eggNOG; KOG1051; Eukaryota.
DR   OMA; GPEHILM; -.
DR   OrthoDB; 35211at2759; -.
DR   Proteomes; UP000032304; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          3..147
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   REGION          887..912
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          406..500
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   912 AA;  101688 MW;  577769A370F6098A CRC64;
     MNPDKFTHKT NEALAASHEL AMSNGHAQFT PLHLAVSLIS DPTGIFPQSI SNAGGENAAQ
     SAERIFNQAL KKLPSQSPPP DEIPASTSLI KVLRRAQAAQ KARGDTHLAV DQLILGLLED
     SQIADLIKEA GVAPAKVKSE VEKLRGKEGR KVESASGDTT FQALKTYGRD LVEQAGKLDP
     VIGRDEEIRR VIRILSRRTK NNPVLIGEPG VGKTAVVEGL AQRIVRGDVP SNLADVRVIA
     LDMGALVAGA KYRGEFEERL KAVLKEVEEA EGKVILFIDE IHLVLGAGRT EGSMDAANLF
     KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSIADTISI LRGLKEKYEG
     HHGVRIQDRA LVVASQLSSR YITGRHLPDK AIDLVDEACA NVRVQLDSQP EEIDNLERKR
     MQLEVELHAL EKEKDKASKA RLVEVRKELD DLRDKLQPLM MKYRKEKQRV DEIRRLKQKR
     EELMFALQEA ERRYDLARAA DLRYGAIQEV ESAIAQLEGT TDENIMLTET VGPEHIAEVV
     SRWTGIPVTR LGQNEKERLI GLAERLHQRV VGQNQAVEAV AEAVLRSRAG LGRPQQPTGS
     FLFLGPTGVG KTELAKALAE QLFDDENQLI RIDMSEYMEQ HSVARLIGAP PGYVGHEEGG
     QLTEAVRRRP YSVVLFDEVE KAHISVFNTL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
     GAEHLLSGLS GKSSMQVARD RVLQEVRRHF RPELLNRLDE IVVFDPLSHD QLRKVARLQM
     KDVAVRLAER GIALAVTDAA LDYILAESYD PVYGARPIRR WLEKRVVTEL SRMLVKEEID
     ENSTVYVDAS PKRNELVYRV EKNGGLVNAA TGQKSEVLIQ IPNGQPRSDA AQAVKKMKVE
     EMDEDEDEEM DM
//
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