ID A0A0D2LVZ3_GOSRA Unreviewed; 912 AA.
AC A0A0D2LVZ3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN ORFNames=B456_001G077600 {ECO:0000313|EMBL:KJB08332.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB08332.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB08332.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM001740; KJB08331.1; -; Genomic_DNA.
DR EMBL; CM001740; KJB08332.1; -; Genomic_DNA.
DR RefSeq; XP_012470367.1; XM_012614913.1.
DR RefSeq; XP_012470372.1; XM_012614918.1.
DR AlphaFoldDB; A0A0D2LVZ3; -.
DR STRING; 29730.A0A0D2LVZ3; -.
DR EnsemblPlants; KJB08331; KJB08331; B456_001G077600.
DR EnsemblPlants; KJB08332; KJB08332; B456_001G077600.
DR GeneID; 105788156; -.
DR Gramene; KJB08331; KJB08331; B456_001G077600.
DR Gramene; KJB08332; KJB08332; B456_001G077600.
DR KEGG; gra:105788156; -.
DR eggNOG; KOG1051; Eukaryota.
DR OMA; GPEHILM; -.
DR OrthoDB; 35211at2759; -.
DR Proteomes; UP000032304; Chromosome 1.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 3..147
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 887..912
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 406..500
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 912 AA; 101688 MW; 577769A370F6098A CRC64;
MNPDKFTHKT NEALAASHEL AMSNGHAQFT PLHLAVSLIS DPTGIFPQSI SNAGGENAAQ
SAERIFNQAL KKLPSQSPPP DEIPASTSLI KVLRRAQAAQ KARGDTHLAV DQLILGLLED
SQIADLIKEA GVAPAKVKSE VEKLRGKEGR KVESASGDTT FQALKTYGRD LVEQAGKLDP
VIGRDEEIRR VIRILSRRTK NNPVLIGEPG VGKTAVVEGL AQRIVRGDVP SNLADVRVIA
LDMGALVAGA KYRGEFEERL KAVLKEVEEA EGKVILFIDE IHLVLGAGRT EGSMDAANLF
KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSIADTISI LRGLKEKYEG
HHGVRIQDRA LVVASQLSSR YITGRHLPDK AIDLVDEACA NVRVQLDSQP EEIDNLERKR
MQLEVELHAL EKEKDKASKA RLVEVRKELD DLRDKLQPLM MKYRKEKQRV DEIRRLKQKR
EELMFALQEA ERRYDLARAA DLRYGAIQEV ESAIAQLEGT TDENIMLTET VGPEHIAEVV
SRWTGIPVTR LGQNEKERLI GLAERLHQRV VGQNQAVEAV AEAVLRSRAG LGRPQQPTGS
FLFLGPTGVG KTELAKALAE QLFDDENQLI RIDMSEYMEQ HSVARLIGAP PGYVGHEEGG
QLTEAVRRRP YSVVLFDEVE KAHISVFNTL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
GAEHLLSGLS GKSSMQVARD RVLQEVRRHF RPELLNRLDE IVVFDPLSHD QLRKVARLQM
KDVAVRLAER GIALAVTDAA LDYILAESYD PVYGARPIRR WLEKRVVTEL SRMLVKEEID
ENSTVYVDAS PKRNELVYRV EKNGGLVNAA TGQKSEVLIQ IPNGQPRSDA AQAVKKMKVE
EMDEDEDEEM DM
//