ID A0A0D2N7Y4_GOSRA Unreviewed; 641 AA.
AC A0A0D2N7Y4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_005G047000 {ECO:0000313|EMBL:KJB28422.1}, Gorai_016070
GN {ECO:0000313|EMBL:MBA0585289.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB28422.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB28422.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0585289.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0585289.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0585289.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0585289.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0585289.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0585289.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001744; KJB28422.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000005; MBA0585289.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2N7Y4; -.
DR EnsemblPlants; KJB28422; KJB28422; B456_005G047000.
DR Gramene; KJB28422; KJB28422; B456_005G047000.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; KTYSNHA; -.
DR Proteomes; UP000032304; Chromosome 5.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR45613:SF207; OS10G0497300 PROTEIN; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 125..159
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 160..194
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 195..229
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 230..264
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 265..299
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 300..334
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 335..369
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 370..404
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 405..439
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 473..507
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 508..542
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 543..577
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 578..612
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 641 AA; 71352 MW; 4084DA20B85E92E7 CRC64;
MLLKSKTYSN HAVQGTSKAL SSLSSLFTKD PLQSSSLIPK PRVQNPRKPL LLCPNEFEYF
VRRQCKSGKI TLNDALTYFN KLVTTEPSPL IQTFNIVLGS VSKLKCNSNV FSMYRKLNVE
GIKPNLYTLS ILMNSCCQLK QMSSGFCVFG EIIKRGFEPD LVTVSILLKG MCVDGKVLDA
VQVFDKMCER GFQGDGVIYG ILINGLCSIG HPGMALELHR KMENSSCQGT LLTFSMVIDA
FCKDGMVDVA ASVFSEMVSK QISPDAVVYG SLIHGFCGLG RLKEAVNVFD EMVSRGLTPD
LIMYNTLIHG FCQVGMWGEA VKIFNRMVEN GISPDVVTFT TLIDSLGKEG KTGEAQRIFD
LMIRQGAKPD IRTYNSLLSG LCSNGHLDEA TKLFGLIVDQ GLELDAFSYN IMISGYCKSW
KMDEAFELFQ KMHGIKPTIV TYNTLIGMLF QEGQVSTAQK MFNEMHVYGQ SPALSTYTVM
LDGLCKHGHI EEALDLFHSL ESTNKKPSIE HFSILIDGMW RAGKSEEARK MFTEISEKGL
SLDVVTYNIM LSGLCKQSMS LEANKLLMEM EEKGCVPDSI SFNTLIHGLL REKEVEKAMN
RLEEMRRRNF SADEGVTSLL LRLAMKDEQC RAALESLPDV I
//
