ID A0A0D2ND29_GOSRA Unreviewed; 1403 AA.
AC A0A0D2ND29;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein {ECO:0000259|SMART:SM00922};
GN ORFNames=B456_005G148400 {ECO:0000313|EMBL:KJB30552.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB30552.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB30552.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001744; KJB30552.1; -; Genomic_DNA.
DR EnsemblPlants; KJB30552; KJB30552; B456_005G148400.
DR Gramene; KJB30552; KJB30552; B456_005G148400.
DR OMA; YSMEMIA; -.
DR Proteomes; UP000032304; Chromosome 5.
DR GO; GO:0070204; F:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity; IEA:InterPro.
DR GO; GO:0070205; F:2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0009063; P:amino acid catabolic process; IEA:InterPro.
DR GO; GO:0009234; P:menaquinone biosynthetic process; IEA:UniProtKB-KW.
DR CDD; cd07037; TPP_PYR_MenD; 1.
DR CDD; cd02009; TPP_SHCHC_synthase; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR Gene3D; 3.40.50.1820; alpha/beta hydrolase; 1.
DR Gene3D; 3.20.20.120; Enolase-like C-terminal domain; 1.
DR Gene3D; 3.30.390.10; Enolase-like, N-terminal domain; 1.
DR Gene3D; 3.40.50.1220; TPP-binding domain; 1.
DR HAMAP; MF_01659; MenD; 1.
DR HAMAP; MF_01660; MenH; 1.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR000073; AB_hydrolase_1.
DR InterPro; IPR029035; DHS-like_NAD/FAD-binding_dom.
DR InterPro; IPR036849; Enolase-like_C_sf.
DR InterPro; IPR029017; Enolase-like_N.
DR InterPro; IPR029065; Enolase_C-like.
DR InterPro; IPR018110; Mandel_Rmase/mucon_lact_enz_CS.
DR InterPro; IPR013342; Mandelate_racemase_C.
DR InterPro; IPR004433; MenaQ_synth_MenD.
DR InterPro; IPR032264; MenD_middle.
DR InterPro; IPR022485; SHCHC_synthase_MenH.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR012001; Thiamin_PyroP_enz_TPP-bd_dom.
DR InterPro; IPR011766; TPP_enzyme_TPP-bd.
DR NCBIfam; TIGR01927; menC_gam_Gplu; 1.
DR NCBIfam; TIGR00173; menD; 1.
DR PANTHER; PTHR42916; 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE SYNTHASE; 1.
DR PANTHER; PTHR42916:SF1; PROTEIN PHYLLO, CHLOROPLASTIC; 1.
DR Pfam; PF12697; Abhydrolase_6; 1.
DR Pfam; PF13378; MR_MLE_C; 1.
DR Pfam; PF02775; TPP_enzyme_C; 1.
DR Pfam; PF16582; TPP_enzyme_M_2; 1.
DR Pfam; PF02776; TPP_enzyme_N; 1.
DR SFLD; SFLDS00001; Enolase; 1.
DR SFLD; SFLDF00009; o-succinylbenzoate_synthase; 1.
DR SMART; SM00922; MR_MLE; 1.
DR SUPFAM; SSF53474; alpha/beta-Hydrolases; 1.
DR SUPFAM; SSF52467; DHS-like NAD/FAD-binding domain; 1.
DR SUPFAM; SSF51604; Enolase C-terminal domain-like; 1.
DR SUPFAM; SSF54826; Enolase N-terminal domain-like; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
DR PROSITE; PS00909; MR_MLE_2; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000256|ARBA:ARBA00023239};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Manganese {ECO:0000256|ARBA:ARBA00023211};
KW Menaquinone biosynthesis {ECO:0000256|ARBA:ARBA00022428};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 838..934
FT /note="Mandelate racemase/muconate lactonizing enzyme C-
FT terminal"
FT /evidence="ECO:0000259|SMART:SM00922"
SQ SEQUENCE 1403 AA; 156066 MW; DDFFDB0D441037BB CRC64;
MELRDARFFK QFCFKFSPTI GVACNMLDHA SEMAYTIQDR ANINAVWASL IVEECFRLGL
TYFCVAPGSR SSPLALAASA HLFVTCISCF DERSLAFHAI GYARGSQKAA VIITTSGTAV
SNLFPAVVEA SEDFVPLLVL SADRPPELQD CGANQSINQV NHFGSFVRFF FSLPPPTDQI
PARMVLTTLD SAVHWATSSP IGPVHINCPF REPLDDCPQN WKSSCLEGLD TWRSNTEPFT
KYIIVQHSYL CNTATRGQME EVLEKIRRVN KGILVVGAIS AEDEVWAVLL MAKYLQWPVV
ADILSGIRLR ELLSSSPEVE ESILFVDYLD HALLSDSVRD LVQFDVIVQI GSRITSNRIS
QMLEKCFPCS YILVDNHPHR HDPSHFVTHR IQSSAIEFAN ILMKAQIPNR SRKWHYYLQA
LNMMVGQEIS FHLSVEHSLS EPYIAHIISE ALSAESALFI GNSMVIRDAD MYGCNWTSDN
HSVADMMLKT ELPCTGILVA GNRGASGIDG LLSTAIGFAV GCNKRVLCVV GDISFLHDTN
GLAILKQRML RKPMTILVIN NRGGAIFSLL PVADRTDPRV LNQYFYTSHN ISVHGLCEAH
GVKHLEVKTK MELHDALISS QKGDTDCVIE VESSIDSNAT FHSYIRKFAC RAAEHALGVI
SKLSPPESMS QGCHCKIQSI SYSVYRIQLC APPTSSALYH DRSIFYREGF ILSLTLEDGS
IGYGEVAPLE ISQENLLDVE EQLRFLFHVM KGVTINYFLP MLKSSFSSWI WKTLGIPVCS
LFPSVRCGLE MAILNAIAMS HGSSLLNILY PLRERTEEKS ENLASIRICA LIDSSGTPEE
VARIAVDLVE EGFTAIKIKV ARRADPVEDA AVIQEVRKKV GCHIDLRVDA NRNWTYEQAI
KFGFLVKDYN LQYIEEPVQH ESDIIRYCEE SGLPVALDET IDNCPENPLN VLVKYNHHQI
VALVIKPTVI GGFEKAAMIA QWAHIQGKMA IISAAFESGL ALSAYILFSC YLDLQNADTC
KLMNNSPASS VAHGLGTYRW LEEDITTDPL GIGRNPSTGF IEASVADATH LLHKFQMNHN
FIHRTFTGEK VLGYHLDLDS NDFSFSVNVQ EIGQRNNGST ILFLHGFLGT NEEWVPIMHA
ISGSARCISV DLPGHGATKI KNCGDDKAAL RSLLSIEIIA DLLLKLIEHV TPDKVTLVGY
SMGARIALYM ALKFSDKIEG AVILSGSPGL EDAVARKIRR VKDDSKARSI VTHGLQLFLN
TWYSGGLWKS LRSHPYFNHI VVRRSVHDDL QGLARVLSGL SPGRQPSLWE DLKHCKVPLM
LVVGENDEKF KRVAQKMWHE IGHDRDDAVS KLHQMVVVPS CGHAVHLENP LPIIRLVRQF
VTGLRSVKLQ EKGNVRDLLI YNQ
//
