ID A0A0D2NEV0_GOSRA Unreviewed; 687 AA.
AC A0A0D2NEV0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Bromo domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_001G268800 {ECO:0000313|EMBL:KJB11628.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB11628.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB11628.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM001740; KJB11628.1; -; Genomic_DNA.
DR STRING; 29730.A0A0D2NEV0; -.
DR EnsemblPlants; KJB11628; KJB11628; B456_001G268800.
DR Gramene; KJB11628; KJB11628; B456_001G268800.
DR eggNOG; KOG1474; Eukaryota.
DR Proteomes; UP000032304; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd05506; Bromo_plant1; 1.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR037377; GTE_bromo.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR46136:SF1; TRANSCRIPTION FACTOR GTE11-RELATED; 1.
DR PANTHER; PTHR46136; TRANSCRIPTION FACTOR GTE8; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 514..533
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 141..213
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 270..352
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 308..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 623..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 549..590
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 341..356
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..387
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 388..414
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 447..468
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 469..484
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 632..651
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 687 AA; 76808 MW; CDB6B25AA962A689 CRC64;
MYQFDSDKHD TFGVPIQVLS LSNMSHSKRK GLIHCLRHEL EQIQMLQKKV ELLRTNGVTV
SSSSDILSCS NVQSLPRVKD IQKLPMMASE QGKKGNPRNG KARELIRGSS GKFKSAKHAS
EANTANIFLM KQCEGLLKRL MGHQYGWVFN EPVDVVKLNI PDYFNVIKHP MDLGTIKKKI
NSGGYASPLQ FYADVRLTFS NAMTYNPPGN DVHVMADTLN KFFEVRWKNI DKKLPAIGAQ
LSQSKAPAED IETSKTVLPA KKRKTTSVTQ QVIPEPVKRM TDEEKHKLGV ELESLLTEMP
MHIIDFLREH SSNGRESEEE EIEIDIDDLS DXXXXXXXXQ LNKSGLSSSP MQQCRGDDQA
NEVVDIRENE PPLSSHPPKE IENDIGHRSI KSFNSGSSRD SDSGSSSDSE SGAAKASSLV
LEAVDSGNQL DEKTSADNPL DRNECNGFDQ LEQTSQAKSS SVESDCHQDG DSAPNERPVS
PEKRYRAAIL KNRFADTILK AREKALTTQV SCKLWFSPNL LYAYMLSIFL LWIRGRRGTL
RNCVVRERNL NIKGRKARLQ AEAKAAEDAQ RQAEAEAAAE ARRKRELERD AARQALLKME
KTVEINENSR FLEDLEMLRA APAEHLPSSV DETSPDHSQD GLGSFKFGSN NPLEQLGLYM
KEDEEEEEGE PSNVPNPVND PEEGEID
//
