ID A0A0D2NVK5_GOSRA Unreviewed; 796 AA.
AC A0A0D2NVK5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=AAA+ ATPase domain-containing protein {ECO:0000259|SMART:SM00382};
GN ORFNames=B456_006G200600 {ECO:0000313|EMBL:KJB37342.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB37342.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB37342.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: In the C-terminal section; belongs to the peptidase M41
CC family. {ECO:0000256|ARBA:ARBA00010044}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the AAA ATPase
CC family. {ECO:0000256|ARBA:ARBA00010550}.
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DR EMBL; CM001745; KJB37342.1; -; Genomic_DNA.
DR RefSeq; XP_012486537.1; XM_012631083.1.
DR AlphaFoldDB; A0A0D2NVK5; -.
DR STRING; 29730.A0A0D2NVK5; -.
DR MEROPS; M41.018; -.
DR EnsemblPlants; KJB37342; KJB37342; B456_006G200600.
DR GeneID; 105800145; -.
DR Gramene; KJB37342; KJB37342; B456_006G200600.
DR KEGG; gra:105800145; -.
DR eggNOG; KOG0734; Eukaryota.
DR OMA; HPCQEEP; -.
DR OrthoDB; 9585at2759; -.
DR Proteomes; UP000032304; Chromosome 6.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd19501; RecA-like_FtsH; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.58.760; Peptidase M41; 1.
DR HAMAP; MF_01458; FtsH; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR005936; FtsH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000642; Peptidase_M41.
DR InterPro; IPR037219; Peptidase_M41-like.
DR NCBIfam; TIGR01241; FtsH_fam; 1.
DR PANTHER; PTHR23076:SF128; ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC_MITOCHONDRIAL; 1.
DR PANTHER; PTHR23076; METALLOPROTEASE M41 FTSH; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF01434; Peptidase_M41; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF140990; FtsH protease domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 383..518
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 99..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 796 AA; 87439 MW; 4E4D0123C159E7DD CRC64;
MILSLSLFCP HHPCLSSPLP IPRFHPPPPS LSFNPTPFCP PPLFLFSRLH PHPFSIPCSL
HPDNVNSDSK LDSHLEPSTP LVSDVDGFEN AAEGIEANNI DEEPENAVDN NGQSDELVGD
KGPKTKIPVM VFFMGIWAMI KNGMDKLLAL DWFSWWLFWR QEKRLDRLIA EADVNPKDAA
KQSALLAELN KHSPESVIKR FEQRDHAVDS RGVAEYLRAL VVTNAIAEYL PDEQAGKPSS
LPTLLQELKQ RASGNVDEPF LSPGISQKHP LHVVMVDPKV SNRSRFAQEL ISTILFTVAV
GLVWLMGAAA LQKYVGSLGG IGTSGVGSSS SYAPKELNKE VMPEKNVKTF KDVKGCDDAK
QELEEVVEYL KNPSKFTRLG GKLPKGILLT GAPGTGKTLL AKAIAGEAGV PFFYRAGSEF
EEMFVGVGAR RVRSLFQAAK KKAPCIIFID EIDAIGSTRK QWEGHTKKTL HQLLVEMDGF
EQNEGIILMA ATNLPDILDP ALTRPGRFDR HIVVPNPDLR GRQEILELYL HDKPLSDDVD
VKAIARGTPG FNGADLANLV NIAAIKAAVE GANKVTASQL EHAKDRILMG TERKTMFLSE
ESKKLTAYHE SGHAIVAFNT EGAHPIHKAT IMPRGSALGM VTQLPSDDET SISKKQLLAR
LDVCMGGRVA EELIFGQDHV TTGARSDLQT ATELAKYMVS NCGMSDAIGP VNIKERPSSE
MQSRIDAEVV KLLREAYDRV TTLLKKHEKA LHALANALLE YETLSAEEIK RILLPHREGG
FPEQQEQQEE GELVLA
//
