ID A0A0D2NZ84_GOSRA Unreviewed; 978 AA.
AC A0A0D2NZ84;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJB19463.1};
GN ORFNames=B456_003G103900 {ECO:0000313|EMBL:KJB19463.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB19463.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB19463.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001742; KJB19462.1; -; Genomic_DNA.
DR EMBL; CM001742; KJB19463.1; -; Genomic_DNA.
DR RefSeq; XP_012470862.1; XM_012615408.1.
DR AlphaFoldDB; A0A0D2NZ84; -.
DR STRING; 29730.A0A0D2NZ84; -.
DR EnsemblPlants; KJB19462; KJB19462; B456_003G103900.
DR EnsemblPlants; KJB19463; KJB19463; B456_003G103900.
DR GeneID; 105788490; -.
DR Gramene; KJB19462; KJB19462; B456_003G103900.
DR Gramene; KJB19463; KJB19463; B456_003G103900.
DR KEGG; gra:105788490; -.
DR eggNOG; KOG1274; Eukaryota.
DR OMA; RYIYCRG; -.
DR OrthoDB; 3686044at2759; -.
DR Proteomes; UP000032304; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR048591; Ctf4-like_C.
DR InterPro; IPR022100; Mcl1_mid.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19932; WD REPEAT AND HMG-BOX DNA BINDING PROTEIN; 1.
DR PANTHER; PTHR19932:SF10; WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1; 1.
DR Pfam; PF20946; Ctf4_C; 1.
DR Pfam; PF12341; Mcl1_mid; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 57..98
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 141..182
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 233..274
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 423..706
FT /note="Minichromosome loss protein Mcl1 middle region"
FT /evidence="ECO:0000259|Pfam:PF12341"
FT DOMAIN 715..819
FT /note="DNA polymerase alpha-binding protein Ctf4-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20946"
FT REGION 343..371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 824..843
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 873..902
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 926..978
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 352..371
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 873..897
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 978 AA; 108312 MW; 59CF885D5604D5AE CRC64;
MKIKSVKLRE AHEVSSNASF CSILWDLQAH HLVTASSSQP SISIHDPLLH SSPPRVLRHH
RDGVTALAIS PNSTCLASGS IDHSVKLYKF PGGEFETNIT RFTLPIRALS FNKSGSMLAA
AGDDEGIKLI NTIDGSIARV LKGHRGPVTG LAFDPNGEYL ASIDSIGTVI YWELQSGRTL
YTLNGVAPDT GSDTSVLNVL SWSPDGETLA VPGMKNDIVM YDRDTAEKLF TLRGDHTQPI
CFMSWSPNGR YMATSSLDKQ VLIWDVKRKQ DIDRQKFDER ICCMAWKPIG NALAVIDVMG
KYGVWESVVP SSMKSPTEDI PISQTRNSNG LLFFDEEDQD LSMSGSLSDL GEDSHGESEP
PSRKRLRKQS VIDDDQHEYV YDELNLVRKT EPQRKVPRVN KENSEKEKDA LKAMTAFRPK
MQEAFQPGST PPQPGKRHFL CYNMLGSITT IKHDEYSHIE IDFHDTSTGP RVPPMTDHYG
FTMASLNENG SVFANPCKGE KNMSTLMYRP FRSWANNSEW YMRFEGEEVK AVALGSTWVA
AVTSLNFLRI FTNGGLQKHI LSLNGPVVTA AGFSNELAIV THVSDCLPSN EQMLEFTLFN
ISKGTQVFKG RLPLTPGSYL TWFGFSEEGQ ITSYDSKGIL RVFTSQYGGT WLPLFSASKE
RKSGENYWVV GLNASKLFCV VCKNPDTFPQ VLPKPVLTLL NLSFPLASSD LGEEALENEF
MLNNLNLSQI QNRIEVTAVE GLDTSSLDDE AFDIEAAQDR CIFRLIASCC NSDKLVRAIE
LVKLLSIEKS VRGAIQLATA LKLPILAERF NDILEERLRN KAEVSNTTAL SSKHDPATKR
SEISEPIVSL SSAKLSAPLF TKKVKSLDRV KFGKKKTDSD QTTNLEDSKE VKDAEKNGGS
SHVCSVKEVK NLETLCPSNL FSKLPNIQEG KKVEEATRSQ SEGPSNKSSN EEAKKVVGEV
TGKQCQRPSN PFLKSKVK
//
