GenomeNet

Database: UniProt
Entry: A0A0D2PVE0_GOSRA
LinkDB: A0A0D2PVE0_GOSRA
Original site: A0A0D2PVE0_GOSRA 
ID   A0A0D2PVE0_GOSRA        Unreviewed;       248 AA.
AC   A0A0D2PVE0;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   31-JUL-2019, entry version 26.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=B456_005G189800 {ECO:0000313|EMBL:KJB31383.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
OC   Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB31383.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB31383.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J.,
RA   Grover C., Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T.,
RA   Marler B.S., Page J.T., Roberts A.W., Romanel E., Sanders W.S.,
RA   Szadkowski E., Tan X., Tang H., Xu C., Wang J., Wang Z., Zhang D.,
RA   Zhang L., Ashrafi H., Bedon F., Bowers J.E., Brubaker C.L., Chee P.W.,
RA   Das S., Gingle A.R., Haigler C.H., Harker D., Hoffmann L.V., Hovav R.,
RA   Jones D.C., Lemke C., Mansoor S., ur Rahman M., Rainville L.N.,
RA   Rambani A., Reddy U.K., Rong J.K., Saranga Y., Scheffler B.E.,
RA   Scheffler J.A., Stelly D.M., Triplett B.A., Van Deynze A.,
RA   Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J., Zaki E.A.,
RA   Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CM001744; KJB31383.1; -; Genomic_DNA.
DR   RefSeq; XP_012479494.1; XM_012624040.1.
DR   EnsemblPlants; KJB31383; KJB31383; B456_005G189800.
DR   GeneID; 105794737; -.
DR   Gramene; KJB31383; KJB31383; B456_005G189800.
DR   OrthoDB; 995926at2759; -.
DR   Proteomes; UP000032304; Chromosome 5.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000032304};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT   DOMAIN       17     77       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     19     78       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION      188    208       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED       69    117       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   248 AA;  28343 MW;  36ED0EE0CC2BCBDE CRC64;
     MEYEYVNGGD DLDGSCQPAG VKKRRLTATQ VEFLERSFEV ENKLESDRKL RLAKELGLQP
     RQVAIWFQNR RARSKNKQLE KDYDSLRATF DKLKADFDNL LKEKDDLKNQ VLALKEKLLI
     KEKGMENLGS FEAIHSSNDE PQKPNPDASH VPLLACKQEE ACSAKSDVFD SDSPHYTDGH
     GYHSSFIEPT DSSNVFEPDQ SDEEDDLSKS LLHPPLFFPK FDCYYDAPAT SCNFSLPVED
     QSFWSSLY
//
DBGET integrated database retrieval system