ID A0A0D2QZJ0_GOSRA Unreviewed; 539 AA.
AC A0A0D2QZJ0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=WPP domain-containing protein {ECO:0000259|Pfam:PF13943};
GN ORFNames=B456_004G055500 {ECO:0000313|EMBL:KJB22536.1}, Gorai_014150
GN {ECO:0000313|EMBL:MBA0583285.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB22536.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB22536.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0583285.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0583285.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0583285.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0583285.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0583285.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0583285.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM001743; KJB22535.1; -; Genomic_DNA.
DR EMBL; CM001743; KJB22536.1; -; Genomic_DNA.
DR EMBL; CM001743; KJB22537.1; -; Genomic_DNA.
DR EMBL; CM001743; KJB22538.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000004; MBA0583285.1; -; Genomic_DNA.
DR RefSeq; XP_012473533.1; XM_012618079.1.
DR RefSeq; XP_012473534.1; XM_012618080.1.
DR AlphaFoldDB; A0A0D2QZJ0; -.
DR STRING; 29730.A0A0D2QZJ0; -.
DR EnsemblPlants; KJB22535; KJB22535; B456_004G055500.
DR EnsemblPlants; KJB22536; KJB22536; B456_004G055500.
DR EnsemblPlants; KJB22537; KJB22537; B456_004G055500.
DR EnsemblPlants; KJB22538; KJB22538; B456_004G055500.
DR GeneID; 105790472; -.
DR Gramene; KJB22535; KJB22535; B456_004G055500.
DR Gramene; KJB22536; KJB22536; B456_004G055500.
DR Gramene; KJB22537; KJB22537; B456_004G055500.
DR Gramene; KJB22538; KJB22538; B456_004G055500.
DR KEGG; gra:105790472; -.
DR eggNOG; KOG1909; Eukaryota.
DR OMA; IASKQCL; -.
DR OrthoDB; 22686at2759; -.
DR Proteomes; UP000032304; Chromosome 4.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR GO; GO:0005096; F:GTPase activator activity; IEA:InterPro.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 1.10.246.200; WPP domain; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR045203; RanGAP1/2.
DR InterPro; IPR025265; WPP_dom.
DR InterPro; IPR038214; WPP_sf.
DR PANTHER; PTHR46761; RAN GTPASE-ACTIVATING PROTEIN 1; 1.
DR PANTHER; PTHR46761:SF8; RAN GTPASE-ACTIVATING PROTEIN 1; 1.
DR Pfam; PF13516; LRR_6; 4.
DR Pfam; PF13943; WPP; 1.
DR SMART; SM00368; LRR_RI; 10.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 14..107
FT /note="WPP"
FT /evidence="ECO:0000259|Pfam:PF13943"
FT REGION 495..539
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 500..523
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 524..539
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 539 AA; 58936 MW; C6C68F1133776C5E CRC64;
MGSGTQTFQH RLLSVKLWPP SHSTRLMLVE RMTKNLTTPS IFSRKCGLLS NDEAEEDAKK
MEELAFAAAD QHYKKEPDGD GSSAVQIYAK ESSRLMLEVI RRGPKVNDGE LADKATDLRG
TVFDISGGHR EFIEAEEAKE LLRPLGEPGN SYTKICFSNR SFGLDAANVA APILSTIKDQ
LTEVDLSDFI AGRPESEALD VMNIFSSVLE GCHLRYLNLS NNALGEKGVR AFGALLKSQN
SLQELYLMND GISEEAARAV SELIPSTEKL KVLHFHNNMT GDEGAFAISE IVKRSCSLED
FRCSSTRVGT DGGLALAEAL KRCAHLKKLD LRDNMFGVEA GVALSKAISQ FTDLTEVYLS
YLNLEDEGTE ALANALKHSA PSLEVLEMAG NDITAKGTAS LAACIASKQF LTKLNLAENE
LKDEGAILIA NALGEGHGQL NEVDMSTNAI RRAGGRHLAQ VVVKKPGFKL LNINGNFISD
EGIDEVKEIF RGSLDMLGPL DENDPEEEDD EEEEDEDEEE NAEHEKGLES KLKDLKINQ
//
