ID A0A0D2RE60_GOSRA Unreviewed; 1006 AA.
AC A0A0D2RE60;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJB30109.1};
GN ORFNames=B456_005G130100 {ECO:0000313|EMBL:KJB30109.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB30109.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB30109.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; CM001744; KJB30108.1; -; Genomic_DNA.
DR EMBL; CM001744; KJB30109.1; -; Genomic_DNA.
DR RefSeq; XP_012478491.1; XM_012623037.1.
DR AlphaFoldDB; A0A0D2RE60; -.
DR STRING; 29730.A0A0D2RE60; -.
DR EnsemblPlants; KJB30108; KJB30108; B456_005G130100.
DR EnsemblPlants; KJB30109; KJB30109; B456_005G130100.
DR GeneID; 105794052; -.
DR Gramene; KJB30108; KJB30108; B456_005G130100.
DR Gramene; KJB30109; KJB30109; B456_005G130100.
DR KEGG; gra:105794052; -.
DR eggNOG; KOG1873; Eukaryota.
DR OMA; CEDADNC; -.
DR OrthoDB; 227085at2759; -.
DR Proteomes; UP000032304; Chromosome 5.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:UniProtKB-EC.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001607; Znf_UBP.
DR PANTHER; PTHR21646; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR PANTHER; PTHR21646:SF39; UBIQUITINYL HYDROLASE 1; 1.
DR Pfam; PF00443; UCH; 1.
DR Pfam; PF02148; zf-UBP; 1.
DR SMART; SM00290; ZnF_UBP; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00972; USP_1; 1.
DR PROSITE; PS00973; USP_2; 1.
DR PROSITE; PS50235; USP_3; 1.
DR PROSITE; PS50271; ZF_UBP; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00502}.
FT DOMAIN 49..186
FT /note="UBP-type"
FT /evidence="ECO:0000259|PROSITE:PS50271"
FT DOMAIN 233..1006
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 78..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 735..813
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 845..864
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..417
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 458..484
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 752..813
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 845..860
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1006 AA; 110714 MW; EE62A80D0B080A2C CRC64;
MGKRVKKNRR VPPKEKKVVA AQSPKAIPQE KTAGIDDVDD EVKAVKERKK CLHFDKGINI
DKLLTKLRSS DPIRCEDCRE GRNDRRGGKG KSKHGKKKGS ASVESKSESK AIWVCLECGH
YVCAGVGLPT ASTSHAVRHL RQTRHHLVVQ WDNPQLRWCF SCNIFIPVEK MEENSESKDV
LYEVVKLIKE RSSESSTNDV EDVLSGSGSV ICDIKSEGTI SNFLDGKNGY VVRGLVNLGN
TCFFNSVMQN LLALNRLRDY FSNLDVSMGQ LTISMKKLFA EIRPEMGLKN AINPKPFFAS
LCSKAPQFRG YQQHDSHELL RCLLDGLYTE ELALKKHINA SKSDAVTASQ DLTFVDAVFG
GQISSTLCCE ECGHSSTVYE PFLDLSLSVP TKKTPSKKAQ PVSRAKKTKL PPKKVGRNRG
KVNKDVDQAP AKVVTAPVPN SESSGPGHIA VPQMEPKVAS SGDSSLSHAA GPSTKADESS
SASRNLFDVV ESQKEQVVES TVKENSAGTD DFAWLDYLTT ENTLPENDTG ADDFSWMDYL
QQEIVADESD LISQNNNTSL QDSEEKELVP NEALAESCEV SVLEGETNKK TEDSSGNLQE
EDLPLLVQDS VVLLLPYKED IPGTLSVREN EASSSNAGLG QEEVEFDGFG DMFNEPEIAE
GPIIGPSLAN EVAETGFMAG SISDSDPDEV DDSNSPVSVE SCLSHFIKPE LLSDDNAWNC
ENCAKILRHQ KLKAKKKQTK MGKDLLNGSE TRSLDMEHQC PNGVRTISNG DISSSGDSSV
FHNKNQNGVK VENGQTSELD SVELEDASPL KSNSSVSSKC YAQEKCGGTR TIDSCNVENH
SGNETFRQSN SHMTENCQSG VSDDEELDSE NLKVKRNATK RVLINKAPPV LTIHLKRFCQ
DARGRLSKLN GHVNFRETID LRPYLDPRCE DADNCNYSLV GVVEHSGTMR GGHYIAYVRG
GEKRKGTTGI DHVGSQWYYV SDQHVRQASI EEVLRCEAYI LFYEKV
//
