ID A0A0D2RFN3_GOSRA Unreviewed; 1054 AA.
AC A0A0D2RFN3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 22-FEB-2023, entry version 21.
DE RecName: Full=MATH domain-containing protein {ECO:0000259|PROSITE:PS50144};
GN ORFNames=B456_005G047400 {ECO:0000313|EMBL:KJB28426.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB28426.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB28426.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001744; KJB28426.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2RFN3; -.
DR EnsemblPlants; KJB28426; KJB28426; B456_005G047400.
DR Gramene; KJB28426; KJB28426; B456_005G047400.
DR Proteomes; UP000032304; Chromosome 5.
DR CDD; cd00121; MATH; 1.
DR InterPro; IPR002083; MATH/TRAF_dom.
DR InterPro; IPR008974; TRAF-like.
DR PANTHER; PTHR47477; TNF RECEPTOR-ASSOCIATED FACTOR HOMOLOG 1A; 1.
DR PANTHER; PTHR47477:SF8; TNF RECEPTOR-ASSOCIATED FACTOR HOMOLOG 1A; 1.
DR Pfam; PF00917; MATH; 1.
DR SMART; SM00061; MATH; 1.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR PROSITE; PS50144; MATH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 62..184
FT /note="MATH"
FT /evidence="ECO:0000259|PROSITE:PS50144"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 344..369
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 426..461
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 585..658
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 682..793
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..440
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 635..656
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 713..781
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1054 AA; 117563 MW; 1DA0567C76D46BE4 CRC64;
MAGVATEEFG VGGSVEGVSR SGEALVEWRS SEQVENGTPS TSPPFWDSDD DDDGGLKPSE
LYGKYTWKIE NFSQINKREL RSNAFEVGSY KWYILIYPQG CDVCNHLSLF LCVANHDKLL
PGWGHFAQFT IAVVNKDPKK SKYSDTLHRF WKKEHDWGWK KFMELSKVYD GFIESDTLII
KAQVQVIKEK ADHPFRCLDC QYRRELVRVY LTNVEQICRR FLDERRQMLG RLIEDKARWL
SFRAFWLGID QNNRHGMSKE KTDVILKVVV KHFFTEKEVT STLVMDSLYS GLKALKGQSK
IKKVKSKVFD AEEMPAPIVH IEKDMFLLVD DVLLLLERAT LEPLPPKDEK GPQNRTKDGN
SGENLNKYSI ERDERRLTEL GRRTVEIFVL AHIFSNKIEA AYQEAIALRR QEELIREEAA
LLAESEQKAK QGASEKEKKS KKKQAKQKRN NRKSKDKGRE EKAIVAIQEK HQEGQPEDGK
EASMMVEQQP VCEKADVLGD ISDVSDSVDG AIEVFPHDSV DKEASPVNCD TDTLEIHPPI
GSSSSGITGL SCVQNGVADK KSPSIMEDSS SMCLTDSLSS AVMSPYKGNS FSNNHNKKSP
SRGKDHQSKT SSDGNILIKE FGNPSSCPAL EAGDRNDVSQ SSKAGESVSE ATIPSLSDQR
KWVERDAVRK EEVLLQKKPI IQDPVDLERP KEKTTAIPSS PRSPPRSPPP TAQFRSEYRS
TGSVGSIPVR KTSSNGLQRS DLPAPSSTSF QMNGLLKSET QKPATLKPTE KATTPQEPMM
SRPSSAPLVP GPRPTAPVVS LVQATPLIAH TTSTAGYLGP DSSAATSYVP QSYRNAIMGN
HVASSSSDFT HPNSPSSGVN PLPVYSQTPP LVSTPVYIPQ SSDRIEPNSV QSDFPFGMVD
RNIMLNASQW MDKSQRDGTR SMHLDHSSSL SEIQNLNLYK SLYNGSREHF SNEFSSCTSG
RQSQCVLADE FPHLDIINDL LDEEHNVGSI GLNKHGATMM MGSSTVLRAH QATILIHRGN
LLPKQTSNLT PTDKSMDWFK LNGRWPHPIY LYFR
//
