ID A0A0D2RI13_GOSRA Unreviewed; 583 AA.
AC A0A0D2RI13;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=WHIM1 domain-containing protein {ECO:0000259|Pfam:PF15612};
GN ORFNames=B456_008G189900 {ECO:0000313|EMBL:KJB50853.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB50853.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB50853.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001747; KJB50853.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2RI13; -.
DR EnsemblPlants; KJB50853; KJB50853; B456_008G189900.
DR Gramene; KJB50853; KJB50853; B456_008G189900.
DR OMA; HRREDIM; -.
DR Proteomes; UP000032304; Chromosome 8.
DR GO; GO:0031213; C:RSF complex; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR028938; Rsf1-like.
DR InterPro; IPR028942; WHIM1_dom.
DR PANTHER; PTHR14296; REMODELING AND SPACING FACTOR 1; 1.
DR PANTHER; PTHR14296:SF3; REMODELING AND SPACING FACTOR 1; 1.
DR Pfam; PF15612; WHIM1; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 83..113
FT /note="WHIM1"
FT /evidence="ECO:0000259|Pfam:PF15612"
FT REGION 276..583
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 301..320
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 324..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 361..376
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 377..398
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..422
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 423..456
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 469..517
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 527..546
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 583 AA; 66579 MW; A554DAD742042B63 CRC64;
MPLLNIAVEF SAEEFETALI TPNDTLADIH IPLLKAIPPI TRMPLTRDTW VTVLCRKLRD
WWHWVADGDL PIVASHGTEI ELYKSLDPGV RVVILKALCD IRVEQDDIRS YIDNSLKHGV
QLSAFRKERI GGDSQGINYW YEDDAVVGHR LYREIRKVEL KKAKMKGSHV PNSATYLWET
VATNFEEFQD VSEKLFASKN RTEASLGKKL KNDMLPEIEK EHKRKERLLK KQHRQALLLD
NFLAVDGLGP GRSLRDRKPV TYTFDDYDRS INEAIKITKR KAPSPDPLNG RDVAKSEPSV
NGKLSGPSHG SEQDSYNLPS PKSPEYDDFD DNKSGELDRS NRRRQRPQRY SAKEFVEAVS
DNEADFDSDD DIVGEAVYDE EYLRKRKQRR QSSSSEGDEE YRWEEENAED EEEEEEDSLS
ISEDSDEAPK VKKLPGRTRR ETKLRSVDEL QSGLRRSKRA TRNRINYRQY ELSESETESK
PEKSNPSDEH SDASEKEEFS EGSQDSNGSD DEQEMKVNPP MEGNSDPVEK EQSQAPEQSS
GSGQDEADGA QKRRFLDLNE LAPGSGCDDG PNTIMKDEDR NDF
//
