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Database: UniProt
Entry: A0A0D2RJM1_GOSRA
LinkDB: A0A0D2RJM1_GOSRA
Original site: A0A0D2RJM1_GOSRA 
ID   A0A0D2RJM1_GOSRA        Unreviewed;       241 AA.
AC   A0A0D2RJM1;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   31-JUL-2019, entry version 24.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=B456_003G094500 {ECO:0000313|EMBL:KJB19310.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
OC   Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB19310.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB19310.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J.,
RA   Grover C., Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T.,
RA   Marler B.S., Page J.T., Roberts A.W., Romanel E., Sanders W.S.,
RA   Szadkowski E., Tan X., Tang H., Xu C., Wang J., Wang Z., Zhang D.,
RA   Zhang L., Ashrafi H., Bedon F., Bowers J.E., Brubaker C.L., Chee P.W.,
RA   Das S., Gingle A.R., Haigler C.H., Harker D., Hoffmann L.V., Hovav R.,
RA   Jones D.C., Lemke C., Mansoor S., ur Rahman M., Rainville L.N.,
RA   Rambani A., Reddy U.K., Rong J.K., Saranga Y., Scheffler B.E.,
RA   Scheffler J.A., Stelly D.M., Triplett B.A., Van Deynze A.,
RA   Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J., Zaki E.A.,
RA   Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
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DR   EMBL; CM001742; KJB19310.1; -; Genomic_DNA.
DR   EnsemblPlants; KJB19310; KJB19310; B456_003G094500.
DR   Gramene; KJB19310; KJB19310; B456_003G094500.
DR   OMA; YLDECFH; -.
DR   Proteomes; UP000032304; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000032304};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT   DOMAIN       40     95       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     42     96       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION      196    227       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED       94    142       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   241 AA;  28562 MW;  D638E82A4DC3978F CRC64;
     MVSFEDSLKT NRPKRSIFKM FDEQENGYDE YLEECFHQPK KRRLTVDQIQ FLEKSFEVDN
     KLEPERKIQL AKDLGLQPRQ VAIWFQNRRA RWKTKQLEKD YDTLLAMYNS LKADYDDLLK
     EKDKLKEEVL QLTDKLQTKE NERRNSEFSD VKPLLLQEPS QKPIVVSMAA CKQEDIDSDN
     IPQYYSDEFH SSLLEAADSS YPFEPDQSDL SQDEEDSLHP PASLSNFGFP VEDHPFWSWT
     Y
//
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