ID A0A0D2RLA9_GOSRA Unreviewed; 353 AA.
AC A0A0D2RLA9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=MADS-box domain-containing protein {ECO:0000259|PROSITE:PS50066};
GN ORFNames=B456_005G142100 {ECO:0000313|EMBL:KJB30381.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB30381.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB30381.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM001744; KJB30381.1; -; Genomic_DNA.
DR RefSeq; XP_012478705.1; XM_012623251.1.
DR AlphaFoldDB; A0A0D2RLA9; -.
DR EnsemblPlants; KJB30381; KJB30381; B456_005G142100.
DR GeneID; 105794204; -.
DR Gramene; KJB30381; KJB30381; B456_005G142100.
DR KEGG; gra:105794204; -.
DR eggNOG; KOG0014; Eukaryota.
DR OMA; IACLRQQ; -.
DR OrthoDB; 621901at2759; -.
DR Proteomes; UP000032304; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00266; MADS_SRF_like; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR033897; MADS_SRF-like.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF149; MADS-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..53
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
FT COILED 77..177
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 353 AA; 39696 MW; 4449052E58331212 CRC64;
MGRVKLKIKK LENPNGRQAT YAKRKHGIMK KANELSILCD VEIVLLMFSP TNKPSLCIGK
RSSLEEIIEK FAQLTPQERA KRKLESLEAL KKTFKKLDHD VNIHEFLGSS TQTIEDLTNQ
ARLLQTRLSE VHRRLSCWTN VDKINNVEQL GQMEDSLKEY LNQIQAHKEN VGKQQQLLSL
ECTSQFQNEM QVPYRMGLEQ QLQTLSWLPN QDSRHIALSD DPNLIPHRDV ECSASSSFGS
YSGYFGTGKS SELSSSGQEN SILNDLSGNG SLQLQLGGQC PLFSYNLNIL NDPKFPPVAE
MNFNETPADY QVNGALQGPR TGFDTTPGSW PSTSGSCAVT MFDEPLYTRL QQH
//
