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Database: UniProt
Entry: A0A0D2RY40_GOSRA
LinkDB: A0A0D2RY40_GOSRA
Original site: A0A0D2RY40_GOSRA 
ID   A0A0D2RY40_GOSRA        Unreviewed;       235 AA.
AC   A0A0D2RY40;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   31-JUL-2019, entry version 27.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=B456_004G123100 {ECO:0000313|EMBL:KJB23980.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
OC   Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB23980.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB23980.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J.,
RA   Grover C., Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T.,
RA   Marler B.S., Page J.T., Roberts A.W., Romanel E., Sanders W.S.,
RA   Szadkowski E., Tan X., Tang H., Xu C., Wang J., Wang Z., Zhang D.,
RA   Zhang L., Ashrafi H., Bedon F., Bowers J.E., Brubaker C.L., Chee P.W.,
RA   Das S., Gingle A.R., Haigler C.H., Harker D., Hoffmann L.V., Hovav R.,
RA   Jones D.C., Lemke C., Mansoor S., ur Rahman M., Rainville L.N.,
RA   Rambani A., Reddy U.K., Rong J.K., Saranga Y., Scheffler B.E.,
RA   Scheffler J.A., Stelly D.M., Triplett B.A., Van Deynze A.,
RA   Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J., Zaki E.A.,
RA   Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
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DR   EMBL; CM001743; KJB23980.1; -; Genomic_DNA.
DR   RefSeq; XP_012474654.1; XM_012619200.1.
DR   STRING; 29730.Gorai.004G123100.1; -.
DR   EnsemblPlants; KJB23980; KJB23980; B456_004G123100.
DR   GeneID; 105791226; -.
DR   Gramene; KJB23980; KJB23980; B456_004G123100.
DR   KEGG; gra:105791226; -.
DR   KO; K09338; -.
DR   OMA; LHSADMF; -.
DR   OrthoDB; 1478443at2759; -.
DR   Proteomes; UP000032304; Chromosome 4.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000032304};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT   DOMAIN       26     86       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     28     87       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION        1     32       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      131    154       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED       78    126       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   235 AA;  27233 MW;  394BAC33520C28D3 CRC64;
     METDYHPAVD EAIAEQAPQI PRNKKKNKLK KKRRFSDEQI RLLESIFESE TKLEPRKKMQ
     LARKLGLQPR QVAIWFQNKR ARWKSKQIEQ DYNTLKANYD NLESRFESLK KEKQSLILQI
     QKLSQLLEEH RKGRKGLDGS STDGGGGGGG SEYGEIKCET EAEGQPSFQH KECLGLQTEN
     ERDDVKQTGQ GGEEFLIMDE YRNDSPASPD KFYGLHSADM FDHSYTNSQW LNFWT
//
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