ID A0A0D2S111_GOSRA Unreviewed; 643 AA.
AC A0A0D2S111;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=B456_012G108300 {ECO:0000313|EMBL:KJB76817.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB76817.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB76817.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/BELL homeobox family.
CC {ECO:0000256|ARBA:ARBA00006454}.
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DR EMBL; CM001751; KJB76817.1; -; Genomic_DNA.
DR RefSeq; XP_012460372.1; XM_012604918.1.
DR AlphaFoldDB; A0A0D2S111; -.
DR STRING; 29730.A0A0D2S111; -.
DR EnsemblPlants; KJB76817; KJB76817; B456_012G108300.
DR GeneID; 105780532; -.
DR Gramene; KJB76817; KJB76817; B456_012G108300.
DR KEGG; gra:105780532; -.
DR eggNOG; KOG0773; Eukaryota.
DR OMA; AGGQMYH; -.
DR OrthoDB; 468484at2759; -.
DR Proteomes; UP000032304; Chromosome 12.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR006563; POX_dom.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR PANTHER; PTHR11850:SF82; OS01G0848400 PROTEIN; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF07526; POX; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00574; POX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 422..485
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 424..486
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 496..563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 497..535
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 643 AA; 70020 MW; 8CB9016265BA215C CRC64;
MAEGFEPYHV PQQSRRDKLR IVAQNHSACV ESTAVTLPGC SGLLPLYDAS LLSSDLLTCA
ANASASHDFH HHQANQLSAS ASGKNSSLVC GVKEGVNSMG FVGGVVNGSS SASHHHPYLD
GQSSLPVNPS SIHDMNNSPF LYTPQNLQTI RDFDQSYNSG GEVVVYKPEP LSLNHESSAT
AQALSLSLSS HNTHQNNLPL ELNLQRYGST IYSDKVTDSG YVVPSIIRGS ASTSNEVSRG
SLPLGPFTGY ASILKGSRFL RPAQMLLEEL CDVGRGLYAE KMTPDSSLMD PSLQNLSGTG
IIDDSLSGGD GGESRRKKSR LISMLDEVYR SYKQYYQQIQ AVVASFEYVA GLGNAAPYAN
LALKAMSKHF RCLKNAITDQ LQFINKPHGR TSPGKDEGPM FGNTERSLYN LAVHNAGFHE
HQPVWRPQRG LPERAVTVLR AWLFEHFLHP YPTDTDKLML AKQTGLSRSQ VSNWFINARV
RLWKPMVEEI HMLEQAQKNS QKEARNPNKS SDHLSSANSI APENPSTSFQ RAQDTPSKRT
RSEPLSDIPL GSEPHNLTYN SLSSHPHVGM GVSMAGGSNG VSLTLGLHQN NGISLSEPFS
FNAAQRFGLG LSSEGYVIGG YEAQNRHFGR DVMGGQLLHD FVG
//
