ID A0A0D2S532_GOSRA Unreviewed; 926 AA.
AC A0A0D2S532;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_009G205400 {ECO:0000313|EMBL:KJB58338.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB58338.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB58338.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001748; KJB58338.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2S532; -.
DR STRING; 29730.A0A0D2S532; -.
DR EnsemblPlants; KJB58338; KJB58338; B456_009G205400.
DR Gramene; KJB58338; KJB58338; B456_009G205400.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; TEVYNQF; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:0000963; P:mitochondrial RNA processing; IEA:EnsemblPlants.
DR GO; GO:0008380; P:RNA splicing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 9.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF82; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 17.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 156..190
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 191..225
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 226..260
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 261..295
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 296..330
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 331..365
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 366..400
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 401..435
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 436..470
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 506..540
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 541..575
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 576..610
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 611..645
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 715..749
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 750..784
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 785..819
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 820..854
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 926 AA; 104594 MW; AA564D5264E924D6 CRC64;
MFRHSRLHRP PLLSHLHHPL KSFHASSPLY WKLRDEYKLT RPEILSRITR LLILGRYNAL
NDLSFDFSDD LLDSVLQNLK LNPKSSLYFF KLASRQQKFR PNLTSYCKIV HILSRARMYD
ETRAYLSELV ASCKNNSSSY LIWNEIVRVY NEFRFSPLVF DMLLKIFAEN GLIKDALNVF
DNMGKYGRVP SLKSCNSLLS NLVKNRESYT ALLVYEQMIR IGIMPDVFTC SIIANAYCKE
GRVNRAVEFV KEMENSGFDL NVVSYNSLID GFVSLGDMEG AKKVMKLMIE KGISRNVVTY
TMLVKGYCKN CEMEEAEKVI KEMEEELMVV DAYAYGVLLD GYCKVGKIDD ALRIQEEMLK
MGLKTNLFVC NSLINGYCKV GKTHEAERIF MCMDDWKIKP DSFSYNTLVD GYCRVGHMSK
AFKLCDEMLQ EGIEPSVLTY NTLLKGLCCA GAFNDALCLW RMMLKKGLTP DEVGCCTLLG
VFFKMGDVES ALGFWKSILA RGFSKNRVVC NTMINGLCKF GKMDDAKEIF GKTMELGCLP
DGITYRILSD GYCRIGEIDE AFKFKDKMER EAILPTVGMY NSLISGIFKS RKLSKLGDLL
TEMHTRGIAP NLVTYGALIS GWCDVGNLNK AFGIFFEMTE RGFAPNIKIC SKVVSCLYRL
GRIDDANILL QKMVGTDPLL AHTGLDSLRA NVSCLNIQNI ANTIDENAKC FALPNNVVYN
IAITGLCKSG KVDDARRFFL ALLQQGFNPD NFTYTTLIHG YSASGDVNEA FRLRDEMLKV
DLKPNIVTYN ALINGLCKSG NLDRARRLFD KLPLKGLAPN AVTYYTLIDG YLKVGKTFEA
SSLTEKMIEE GISPSLATNS ALVSGLREQE EKEKITKLHA MMHIVCPFLD FKPSLNRMLL
IESSDPKASE NSCFAFETML MEARKS
//
