ID A0A0D2S946_GOSRA Unreviewed; 638 AA.
AC A0A0D2S946;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_006G247100 {ECO:0000313|EMBL:KJB38291.1}, Gorai_001763
GN {ECO:0000313|EMBL:MBA0588668.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB38291.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB38291.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0588668.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0588668.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0588668.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0588668.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0588668.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0588668.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001745; KJB38291.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000006; MBA0588668.1; -; Genomic_DNA.
DR RefSeq; XP_012487249.1; XM_012631795.1.
DR AlphaFoldDB; A0A0D2S946; -.
DR EnsemblPlants; KJB38291; KJB38291; B456_006G247100.
DR GeneID; 105800589; -.
DR Gramene; KJB38291; KJB38291; B456_006G247100.
DR KEGG; gra:105800589; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; CDRYHEM; -.
DR OrthoDB; 590035at2759; -.
DR Proteomes; UP000032304; Chromosome 6.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF287; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 142..176
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 177..211
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 212..246
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 247..281
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 282..316
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 317..351
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 352..386
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 422..456
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 458..492
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 493..527
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 528..562
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 563..597
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 638 AA; 72219 MW; C6D29F4EACB99601 CRC64;
MQLIERLPKT PNVSLLTQNA SQISSPNAKK IPLLVHNDFE FHIRHQCKSG KINLNDALGY
FDKLIKVKPF PSTDTFNHVL GSVLKLSRDS NVISLYRKLN YEGIKPNLCT LNILLSSYYH
LRRMDFGFCV LGDIFRRGFE PDYATLGRLL KGLCVEGKGF EAVQVFAKMR ERGFQGDVFT
YGILIYGLCS IGESCPALNL FRKMAKRNCE GYLRIYGTTI GSLYKDKLVD EGLNLFFEMV
SKGITPDVVV YSSLVSGLCS LGRLKEAVKF FDEMIGRGIA ADLVMYNLLI HGFSREGMWK
EAIRIFDRMV GEGISPDEIT FTTLISCLCK KGMVVKAHEM FAFMRQKEMK PTLFTYNSLM
DGLCRAGQLD EAAKLFRSIP DQGYEVNVIS YNIMINGYCK SQKIDEGFQL FRDMQFQGCK
PNARTYNTLI QALCRVGRVR TAKKMFDEMY VCGSQSPTSF TYTIMLDGLC KNGHVDEAIA
LFRSLEGTKY ESSIELYSIL IYGMCRTGRM EEARNMFNEM SRKGFVPDVV TYNILIDGLC
KKGMILEANK LIVEMEEKGC LPNSISFNII IQGFLRENNI PEAMNLLKEM RRRNFAPNEA
VTSLLLNLAV EDSQCRATLE SLPVPDALKP ENFLGKSL
//
