ID A0A0D2S954_GOSRA Unreviewed; 259 AA.
AC A0A0D2S954;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=B456_009G272600 {ECO:0000313|EMBL:KJB59793.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB59793.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB59793.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001748; KJB59793.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2S954; -.
DR STRING; 29730.A0A0D2S954; -.
DR EnsemblPlants; KJB59793; KJB59793; B456_009G272600.
DR Gramene; KJB59793; KJB59793; B456_009G272600.
DR eggNOG; KOG1075; Eukaryota.
DR OMA; IGTERIC; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47074; BNAC02G40300D PROTEIN; 1.
DR PANTHER; PTHR47074:SF61; RNASE H TYPE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 108..228
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 259 AA; 30158 MW; E8C96A2AE9382C68 CRC64;
MEYIRRGKWR LLLIPFNWPL RKEYYRSHLQ LQIVKICSFG KCKVFCCALW NSRNQLVHER
KIVSGRDLVH IIKAYLAEIE TVGMEKRTLK TVEVQRHWEA RTQDTIHFDA AFDTNRYRSA
SGVIVRDWRG KLRALKTTLH SNISSPFLAE AYACLQAVKL GLAMGLRSVP IMGDSKTVIK
KCQAKGMDKS IVGAVIRDIQ KHSSRFQEII FQFIQKLENY QAHKLAKETL EKGEERNLIG
TERICNEEPL QEEWARNPD
//
