ID A0A0D2SIH5_GOSRA Unreviewed; 865 AA.
AC A0A0D2SIH5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJB41786.1};
GN ORFNames=B456_007G121400 {ECO:0000313|EMBL:KJB41786.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB41786.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB41786.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001746; KJB41786.1; -; Genomic_DNA.
DR RefSeq; XP_012490303.1; XM_012634849.1.
DR AlphaFoldDB; A0A0D2SIH5; -.
DR STRING; 29730.A0A0D2SIH5; -.
DR EnsemblPlants; KJB41786; KJB41786; B456_007G121400.
DR GeneID; 105802939; -.
DR Gramene; KJB41786; KJB41786; B456_007G121400.
DR KEGG; gra:105802939; -.
DR eggNOG; KOG3322; Eukaryota.
DR OMA; LHGWTLI; -.
DR OrthoDB; 5475902at2759; -.
DR Proteomes; UP000032304; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005655; C:nucleolar ribonuclease P complex; IEA:InterPro.
DR GO; GO:0000172; C:ribonuclease MRP complex; IEA:InterPro.
DR GO; GO:0001682; P:tRNA 5'-leader removal; IEA:InterPro.
DR InterPro; IPR018000; Neurotransmitter_ion_chnl_CS.
DR InterPro; IPR039182; Pop1.
DR InterPro; IPR009723; Pop1_N.
DR InterPro; IPR012590; POPLD_dom.
DR PANTHER; PTHR22731; RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1; 1.
DR PANTHER; PTHR22731:SF3; RIBONUCLEASES P_MRP PROTEIN SUBUNIT POP1; 1.
DR Pfam; PF06978; POP1_N; 1.
DR Pfam; PF08170; POPLD; 1.
DR PROSITE; PS00236; NEUROTR_ION_CHANNEL; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 38..183
FT /note="Pop1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF06978"
FT DOMAIN 512..588
FT /note="POPLD"
FT /evidence="ECO:0000259|Pfam:PF08170"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 45..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..105
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 865 AA; 97909 MW; 98E1B7FADB6591D8 CRC64;
MAVEGSKKPQ ASASQPPRKI NLQKFAESRA AELESLHSTV SARLNNDFRS RRNKRRRTTA
FDNEASKKRN RKRQRLIKVD KSNVSGLETE QKKNESPLPR RLRRRLELKN NPQSGFVTSG
DGTKRLRTHV WHAKRFTMAK RWGFYLPLGL HGRGGGSRAV LRWFKQGVLL HDASYNIAVQ
LEGPEDYLVA TLEMVLVPFT SVKSEGVSDS VLSGVTYGTA MLYHVGAPLS QPIAPVTYMW
RPHQGSKKDD NNNCLDVVGS KEQCRTNSGS CFRQLWVWIH ASAFNEGYDA LKCACQKLMI
ERGITINCFS NEGQLAKLEL IGSKAFQLLQ KTVHPVSCIV ENSWQLQKCS FQRDRDDFQN
KNSFTLEDEE CSPSCAILSF TVKDPRLLLT KETKDFHEPD SIIDMQEVGA SDCITLTGNL
DKNEEVASTS CPKPEGIENL SGGRNLWDSS SRIDPPEEEN ELCMEKHQQR MGFFCLDEPK
PGPPKTSNKV QCSRSCPILL LKNNNKKGSP MGWSIVVPIS WARVFWNFLV SKGAHVIGLR
EKHWIACEIG LPYFPSDFPD CNSYLTLNEI EATTSRKNAE QHPPAVRPFR IPIPSPWNVV
HTAFDKLSRR VKEAQVSSGE NIVRKYSMSN SSCERSDVTS LRHRDSFGGI VARTSSLLTE
FLNGIQGEHL LLFPQLQNRK LSLVKVMKDK NMMEKGQNGI TQISYNHKLC FVRVHLHAYK
EGVFEDGAVI CAPRLTDISM WTCSTGSIEG RLEMPNSAVG SYFKEQPSGK WELNVPDDPA
SREYHRWPVG FVTTGFVRGS KKPTAEAFCE AVLLASLREE QWKEMTVNRR RKEIYVLVRN
LRSSAYRLAL ATIILEEEEE DVRFL
//
