ID A0A0D2SQC8_GOSRA Unreviewed; 1695 AA.
AC A0A0D2SQC8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Sister chromatid cohesion protein {ECO:0000256|RuleBase:RU364107};
GN ORFNames=B456_006G011000 {ECO:0000313|EMBL:KJB33435.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB33435.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB33435.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU364107}.
CC -!- SIMILARITY: Belongs to the SCC2/Nipped-B family.
CC {ECO:0000256|ARBA:ARBA00009252, ECO:0000256|RuleBase:RU364107}.
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DR EMBL; CM001745; KJB33435.1; -; Genomic_DNA.
DR EnsemblPlants; KJB33435; KJB33435; B456_006G011000.
DR Gramene; KJB33435; KJB33435; B456_006G011000.
DR Proteomes; UP000032304; Chromosome 6.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061780; P:mitotic cohesin loading; IEA:InterPro.
DR GO; GO:0010468; P:regulation of gene expression; IEA:InterPro.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026003; Cohesin_HEAT.
DR InterPro; IPR024986; Nipped-B_C.
DR InterPro; IPR033031; Scc2/Nipped-B.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR21704:SF18; NIPPED-B-LIKE PROTEIN; 1.
DR PANTHER; PTHR21704; NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED; 1.
DR Pfam; PF12765; Cohesin_HEAT; 1.
DR Pfam; PF12830; Nipped-B_C; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306, ECO:0000256|RuleBase:RU364107};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU364107};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|RuleBase:RU364107};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 666..716
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 159..201
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 356..390
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1458..1480
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 159..175
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1458..1473
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1695 AA; 189402 MW; 985D82B624F890B3 CRC64;
MSNPSSSSWV SDQPGQRLMD MAHCGIGLTN TIHSEVAQCL PLPSLPVFCG ASDLELRLFD
DPAVGASRSL NRPQIIAQAS RIADLLRETD VSYLNLRDEA DSVSHDHLEP LELHAQVLQY
NPAAFDLSGL VKGKNSGGAV FERKPSESSA PLIGQFQRET RGNRNQQTDV VANDMPKSSS
KKPKIKKKAD DTGSSVLPDP SELQDAIIGN FRELLEDFCS RAQIPTDDRD EMEWLSLPVN
DVRMLVNEIM SVRAKRLLHL VPVDILVKLL RVLDHQIHRA EGLSIDECEH QDSDVFSLVF
CALESIHASL AIMAHNDMPK QLYHEEIIER ILEFSRHQIT DVMSAYDPSY RALHKPSENG
AVEDDDDEEP DAELGSASKK RRSTKTAKAK KSAMNKVSGA VNAILQKLCT ILGLLKDLLL
IEKLSDSCVL QLLKTSFTTF LVDNIQLLQL KAIGLLTGIF YSYTQHRTYI IDEMVQLLWK
LPVSKRALRA YHLPDEEQRQ IQMITALLIQ LVHSSANLPE ALNQTSIGSP ILEVSVDAGY
LTKCHESVQD TCCHFWTRVL QRLASVKTQE ASELKLMIEN LVTDLLTTLN LPEYPAAAPI
LEVLCVLLLQ NAGLKSKDTS VRAMAIDLLG TIAARLKHDA LLNRKDKFWI SEELLSGDDT
DRSYPKGACS ICFDGKEEKV LYRCQGCQRF FHSDCMGVRE QEGPNRSWYC QFCMCKKQLL
VLQSYCESQY KDDEKPKRGR SESSKSSDPI TKVEIVQQML LNHLQDAASA DDAHLFVRWC
YLCLWYKDGP KSQQNFNYYV SRLRSKAIVR DSGTVSSLFL RDSVKKIALA LGQNNSFSRG
FDKILYLLLV SLRENSPVIR AKALRAVSII VEVDPEVLGD KRVQVAVEGR FCDSAISVRE
AALELVGRHI ASHPDVSLKY FEKVAERIKD TGVSVRKRAI KIIRDMCNAD PNFSGFTNAC
IEIISRVSDD ESSIQDLVCK TFYEFWFEEP SGMQTQYPGD GSSIPLEVAK KTEQIVETLR
QLPNHQFLVT VIKRNLVLDF FPQSAKAAGI NPVSLAAVRR RCEVMCKCLL ERILQTEETS
NVEAEVPTLP YVLALHAFCV VDPSLCMPAS DPSQFVITLQ PYLKSQVDNR VGAQLLESII
FVIDAVVPLM RKLPPSVGDE LKQDLKHMIV RHSFLTVVHA CIKCLCSVSR KAGNTGDVVE
YLIQLFFKLL DSRATDNKQQ VGRSLFCLGL LIRYGNSLFG GSSSKNIDVA SSISLFKKYL
QMDDFSIKVR SLQALGFALI ARPEYMLEKD IGKILEAALA ASSNVRLKMQ MLQNLLEYLL
DAESQMETDK ASDDQVQYTV EGGHSVPVAA GAGDTNICGG IVQLYWDNIL GRCLDFNEEV
RQSALKIVEV VLRQGLVHPI TCVPCLIALE TDPLDVNQKL AHHLLMNMNE KYPAFFESRL
GDGLQLSFIF MRSISGNAHE NPNEKSQSKL PGNLKGKSDA GSLTQARLGV SRIYKLIRGN
RVARNKFMSS IVRKFDTPIW NDSVIPFLMY CTETLALLPF SSPDEPLYLI YTINRVIQVR
AGALEANLKT LSSNLLQTDA QMMTSNNGIV QPDYSQAAYN HMATLDLNGT FQEPPVVQPP
FFHMTSIDLN GTIQQNFSYQ SISHYPPAIE TTMHKMAPSE PRALSKDEIQ KIQVLSNPAN
PSFLWPASTG FEFHG
//
