ID A0A0D2T175_GOSRA Unreviewed; 1033 AA.
AC A0A0D2T175;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 24.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_011G024000 {ECO:0000313|EMBL:KJB69448.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB69448.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB69448.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01002}.
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DR EMBL; CM001750; KJB69448.1; -; Genomic_DNA.
DR EMBL; CM001750; KJB69449.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2T175; -.
DR EnsemblPlants; KJB69448; KJB69448; B456_011G024000.
DR EnsemblPlants; KJB69449; KJB69449; B456_011G024000.
DR Gramene; KJB69448; KJB69448; B456_011G024000.
DR Gramene; KJB69449; KJB69449; B456_011G024000.
DR Proteomes; UP000032304; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR014977; WRC_dom.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF42; PROTEIN B160; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF08879; WRC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51667; WRC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 7..51
FT /note="WRC"
FT /evidence="ECO:0000259|PROSITE:PS51667"
FT DOMAIN 242..288
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 680..987
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 124..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 766..787
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 806..848
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..152
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 766..786
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1033 AA; 117283 MW; 733EE64F1B57D62D CRC64;
MEGEGAIPDH LRCNRTDGRQ WRCKRRVMEG KKLCELHHIQ GRHRQNKQKV PESLKMQRKK
RKKKVFEKNK LEIRAKLLKL ARPVKRKRVI GGESEALDEA VRKMKLKRGD LPLELIRMVL
KREAEKKKKK RKESECSDFD DDDDDDDDDE KGDLMRELPN GLMAISSSSP HFDNAGSCSG
SGSASGSGSV SGSCINVKVG ETDNNAVAIT RRRFRSKNIE PLPVGTLQKN GANLRRGRRI
RCHWCRKGGA PNLIKCSSCK QQFFCLDCIK EHYFFKREEV QVACPVCRGT CGCRACSVSQ
RRDDECKEFL RDKIKVDKVL DFHYLICMLL PVFKQINQDQ SVEIDVEAKI QGKKLCDIQV
QPAESGGNKE YCCYCKTLIL DFHRSCPKCS YSLCLSCCRD IFQGNLFGTI KEVNCKCPKR
RKTCLPGICL SDRKSVRITR QTSDSRYSDS FVSLPSQKAP DGSVPISCPP SEFGGCGDGL
LDLRCILPQS WFKELEVSAE EIVGSYELPE AFDTFSCCSL CPATDDEAKR VKQLQEASRR
ENSNDNFLFY PTVLNIHGDN LEHFQKHWCK GHPVIFRNVL RTTALSWDPI FLFCSYLKNS
VAKAENEEPS KATTCSDWFE VEIGIKQLFL GSLRGLAQSS MCDEKLKLKG WLSSPLFQEQ
FPDHYSEIIQ SLPLREYMNP GSGILNIAAR LPQEITKPDL GPSVSISYCS SEELAQANSV
TNLCYGLCDM VNVLAHATDA PVCMKQLNKI RKLMKKKKFQ DERELAKTHL DQKMANEVKE
KSKSNGENIK VGLNGMIYKE MHSRNTVPKL SRSPSAVHDA HDKEDSSDSD SDSDSDCNSN
SEAALHPCDT IHGSEALEDQ EIFGKRTDLA KSCGAEWDVF RRQDVPKLME YLRKHSNEFG
HTCGFQKHVV HPILDQNFFL DTSHKRRLKE EYEIEPWTFE QHVGEAIIIP AGCPYQIRNV
KSCVNVVLDF VSPENVTECI RLINEFRLLP DDHKAKAKKF EVEKMALYRI SAAIKEIREL
ICSEFRSSAE LSE
//
