ID A0A0D2T5D5_GOSRA Unreviewed; 535 AA.
AC A0A0D2T5D5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_006G274800 {ECO:0000313|EMBL:KJB38835.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB38835.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB38835.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001745; KJB38834.1; -; Genomic_DNA.
DR EMBL; CM001745; KJB38835.1; -; Genomic_DNA.
DR EMBL; CM001745; KJB38836.1; -; Genomic_DNA.
DR EMBL; CM001745; KJB38837.1; -; Genomic_DNA.
DR RefSeq; XP_012487673.1; XM_012632219.1.
DR RefSeq; XP_012487674.1; XM_012632220.1.
DR RefSeq; XP_012487675.1; XM_012632221.1.
DR RefSeq; XP_012487676.1; XM_012632222.1.
DR RefSeq; XP_012487678.1; XM_012632224.1.
DR AlphaFoldDB; A0A0D2T5D5; -.
DR STRING; 29730.A0A0D2T5D5; -.
DR EnsemblPlants; KJB38834; KJB38834; B456_006G274800.
DR EnsemblPlants; KJB38835; KJB38835; B456_006G274800.
DR EnsemblPlants; KJB38836; KJB38836; B456_006G274800.
DR EnsemblPlants; KJB38837; KJB38837; B456_006G274800.
DR Gramene; KJB38834; KJB38834; B456_006G274800.
DR Gramene; KJB38835; KJB38835; B456_006G274800.
DR Gramene; KJB38836; KJB38836; B456_006G274800.
DR Gramene; KJB38837; KJB38837; B456_006G274800.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; EMGVEHS; -.
DR OrthoDB; 360360at2759; -.
DR Proteomes; UP000032304; Chromosome 6.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR47930:SF2; PENTATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G04250); 1.
DR PANTHER; PTHR47930; YALI0C12947P; 1.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 449..483
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 101..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 535 AA; 60958 MW; 7AD2C49AFB38DD0F CRC64;
MPVVSEKFPL GIGASPFLCT RFILQTNDNT KKMDCIFSSI TTYPFITLRG KLQQSICVTN
LAHPNTRICY SKQPKNRRYP RRTKLPPDFG VNLFLEKPRT ETDMSTDTEQ IKSIYGHNSD
SPEEEDDKED HVNIDLAWES DEVEAISSLF QGRIPQKPGK VGRERPLPLP LPYKLRPLGF
PMPKKHVKKS SAGVNSSRAS VSQQLYKNPS FLIGLSKEIK DLASDDDVSA VLNKWAPFLR
KGSLSITIRE LGLMDLPQRA LQAFCWAQKM PHLYPDDRIL TSTVEVLARK RELKLPVNLE
KFTSSTNRSL IEAMLKGFVK GGSLNLAWKL LSVVKQSKRM LDPGIYAKLI LELGKNPDKH
ILVEELLGDL GERDDLNLSQ QDCTAIMKVC IRHRKFEIVE SLFYWFKQSG RDPSVVMYTT
LLHSRYSENK YMEALALVWE MEARECLLDL PAYRVVIKLF IGLKDLARAV RYFSKLKEAG
FSPTYDMYRD LINMYMVAGR VGKCKEVCKE ASMAGFSLDK RTLLNLSKLE KDILG
//
