ID A0A0D2TFH6_GOSRA Unreviewed; 747 AA.
AC A0A0D2TFH6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_007G154000 {ECO:0000313|EMBL:KJB42455.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB42455.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB42455.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001746; KJB42455.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2TFH6; -.
DR EnsemblPlants; KJB42455; KJB42455; B456_007G154000.
DR Gramene; KJB42455; KJB42455; B456_007G154000.
DR Proteomes; UP000032304; Chromosome 7.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR044716; LEUNIG-like.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44376:SF22; TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED; 1.
DR PANTHER; PTHR44376; TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 466..507
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 508..540
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 551..586
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 715..747
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 282..378
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 425..450
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 747 AA; 81644 MW; D850FDBA9F6EB78E CRC64;
MAQSNWEADK MLDVYIHDYM LKRKLHASAK AFMTEGKVAT DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSVAAAAYIE AQQIKAREQQ QLQMQQLQLM QHRNVQLQRR DPNHPALGGS
VNTNSEGMMG HPSASILAMK LYEERVKNPQ SVDSETSSAL IDANRMALLK TQANPHSQLV
QSSRGNKSAA LQQIQSQTPL ATATAQDIKS EVNFGGNQKS LPMDPSSIYG QAILQPKSGL
GGLNQGVSSL SLRGWPLTAQ IQGNLGNSAN FGNTDPCRFG QLSRGNLNAK DGQSARNNGS
TCSPVHSSSP KKKMSQMSHS SSQQQEQLQQ QQPSQQLHQN NRKRKQPSSS GAANSTGTGN
TVGPSPNSPP STHLPGDAIT TASSLQHVNN ASKSMICGED STAHLSSSSN LLEDIERFDP
LDENTETLLS HDGSDVRGIY GTVKQSPNEH QKESVKGFTF AEVGCIRTRN SKVTCCHFSS
DGKFLASSGH DKKVVLWNMD TLQTVSSPGE HKLVITDVRF RPNSTQLATA SVDKSVRIWD
AANPSYCVQA YNGHSSPVMS LDFHPRKTEL FCFCDNDNEI HYWNLNLFSC MRMSKGGMAQ
VRFQPRLGHF LAAASDKVVS IFDVETDRQI LTFQGHSEIV NYICWDVNGD YLASVSHDLV
KLWSVATGEC IQELSSGGNQ FHSCVFHPSY STLLVIGGIS SLELWNMAEN KSMTIPAHEN
IISALAQSPV GGIVATASHD GSVKLWK
//