GenomeNet

Database: UniProt
Entry: A0A0D2TFH6_GOSRA
LinkDB: A0A0D2TFH6_GOSRA
Original site: A0A0D2TFH6_GOSRA 
ID   A0A0D2TFH6_GOSRA        Unreviewed;       747 AA.
AC   A0A0D2TFH6;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=B456_007G154000 {ECO:0000313|EMBL:KJB42455.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB42455.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB42455.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA   Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA   Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA   Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA   Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA   Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA   ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA   Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA   Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA   Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM001746; KJB42455.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0D2TFH6; -.
DR   EnsemblPlants; KJB42455; KJB42455; B456_007G154000.
DR   Gramene; KJB42455; KJB42455; B456_007G154000.
DR   Proteomes; UP000032304; Chromosome 7.
DR   GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR044716; LEUNIG-like.
DR   InterPro; IPR006594; LisH.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR44376:SF22; TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED; 1.
DR   PANTHER; PTHR44376; TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8; 1.
DR   Pfam; PF08513; LisH; 1.
DR   Pfam; PF00400; WD40; 5.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS50896; LISH; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 4.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   REPEAT          466..507
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          508..540
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          551..586
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          715..747
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REGION          282..378
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          425..450
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   747 AA;  81644 MW;  D850FDBA9F6EB78E CRC64;
     MAQSNWEADK MLDVYIHDYM LKRKLHASAK AFMTEGKVAT DPVAIDAPGG FLFEWWSVFW
     DIFIARTNEK HSVAAAAYIE AQQIKAREQQ QLQMQQLQLM QHRNVQLQRR DPNHPALGGS
     VNTNSEGMMG HPSASILAMK LYEERVKNPQ SVDSETSSAL IDANRMALLK TQANPHSQLV
     QSSRGNKSAA LQQIQSQTPL ATATAQDIKS EVNFGGNQKS LPMDPSSIYG QAILQPKSGL
     GGLNQGVSSL SLRGWPLTAQ IQGNLGNSAN FGNTDPCRFG QLSRGNLNAK DGQSARNNGS
     TCSPVHSSSP KKKMSQMSHS SSQQQEQLQQ QQPSQQLHQN NRKRKQPSSS GAANSTGTGN
     TVGPSPNSPP STHLPGDAIT TASSLQHVNN ASKSMICGED STAHLSSSSN LLEDIERFDP
     LDENTETLLS HDGSDVRGIY GTVKQSPNEH QKESVKGFTF AEVGCIRTRN SKVTCCHFSS
     DGKFLASSGH DKKVVLWNMD TLQTVSSPGE HKLVITDVRF RPNSTQLATA SVDKSVRIWD
     AANPSYCVQA YNGHSSPVMS LDFHPRKTEL FCFCDNDNEI HYWNLNLFSC MRMSKGGMAQ
     VRFQPRLGHF LAAASDKVVS IFDVETDRQI LTFQGHSEIV NYICWDVNGD YLASVSHDLV
     KLWSVATGEC IQELSSGGNQ FHSCVFHPSY STLLVIGGIS SLELWNMAEN KSMTIPAHEN
     IISALAQSPV GGIVATASHD GSVKLWK
//
DBGET integrated database retrieval system