ID A0A0D2TJG7_GOSRA Unreviewed; 828 AA.
AC A0A0D2TJG7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=B456_007G219900 {ECO:0000313|EMBL:KJB43860.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB43860.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB43860.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; CM001746; KJB43858.1; -; Genomic_DNA.
DR EMBL; CM001746; KJB43860.1; -; Genomic_DNA.
DR RefSeq; XP_012491914.1; XM_012636460.1.
DR RefSeq; XP_012491915.1; XM_012636461.1.
DR AlphaFoldDB; A0A0D2TJG7; -.
DR EnsemblPlants; KJB43858; KJB43858; B456_007G219900.
DR EnsemblPlants; KJB43860; KJB43860; B456_007G219900.
DR GeneID; 105803984; -.
DR Gramene; KJB43858; KJB43858; B456_007G219900.
DR Gramene; KJB43860; KJB43860; B456_007G219900.
DR KEGG; gra:105803984; -.
DR eggNOG; KOG0167; Eukaryota.
DR OrthoDB; 615890at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000032304; Chromosome 7.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16664; RING-Ubox_PUB; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR045210; RING-Ubox_PUB.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR23315; U BOX DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR23315:SF7; U-BOX DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF00514; Arm; 3.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 5.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50176; ARM_REPEAT; 3.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 235..309
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REPEAT 585..627
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 667..709
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 708..749
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REGION 327..387
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 403..512
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 179..209
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 327..383
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 403..492
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 828 AA; 89741 MW; FCA1640F3CAAF895 CRC64;
MEISLLKALL SNISSFLNLS SFEKINSEPV QKYYQRAEEI LKLLKPILNA IIDSEVTSDE
VLIKAFEGLG LSIEELREQC DSWQPLLSKV YFVLQVESLI SKIRNPSLEI VQFLKCSHLH
LPDELSSASL EHCLQKIKHV GYEQTSSVIR EAIRDQVDSV GPSSEILAKI AENLSLGSNQ
EILIEAVALE KLKENAEQAE KTAEAEFVDQ IIGLVTRMHE RLVLIKHSQT CSPVPIPADF
CCPLSLELMT DPVIVASGQT YERAFIKKWI GLGLIVCPKT RQTLAHTNLI PNYTVKALIA
NWCESNNVKL PDPMKSMSPL LLHAESGLSR DSSSVPRSRS SQPISPESQS TSQTDKNLVT
SSGLNREGTS PLHPRSTSKG SLPAIDGNGE YLDVARISLS SAEEGSNLEQ RGSELVGQPP
LSPSINEFHN NGQSSLNHAR SDSASSILSN SDFPQGPSGD ANESLEASTH LRANSGVNGE
VKSDSQPVAS SAIPQREAEF SPRFMDPRSR SQRIWRRQSE RFIPRIISSP GIENKADLSG
TETQVKKLVE DLKSTSVDTQ REATAQLRLL AKHNMDNRII IANCGAISML VNLLRSPDAK
TQENAVTALL NLSINDNNKT AIANANAIEP LIHVLETGTP EAKENSAATL FSLSVIEDNK
VKIGRSGAIG PLVNLLGNGT PRGKKDASTA LFNLSIFHEN KARIVQAGAV RHLVELMDPA
AGMVDKAVAV LANLATIPEG RTSIGQEQGI PVLVEVVELG SARGKENAAA ALLQLCTNSN
RFCSLVLQEG AVPPLVALSQ SGTPRAREKA QTLLSVFRNQ RHGNSGRG
//
