ID A0A0D2TPE0_GOSRA Unreviewed; 670 AA.
AC A0A0D2TPE0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN ORFNames=B456_009G127000 {ECO:0000313|EMBL:KJB56601.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB56601.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB56601.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR EMBL; CM001748; KJB56601.1; -; Genomic_DNA.
DR RefSeq; XP_012443157.1; XM_012587703.1.
DR AlphaFoldDB; A0A0D2TPE0; -.
DR STRING; 29730.A0A0D2TPE0; -.
DR EnsemblPlants; KJB56601; KJB56601; B456_009G127000.
DR GeneID; 105768018; -.
DR Gramene; KJB56601; KJB56601; B456_009G127000.
DR KEGG; gra:105768018; -.
DR eggNOG; ENOG502QS51; Eukaryota.
DR OMA; NCYAKQQ; -.
DR OrthoDB; 352165at2759; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669:SF236; PROTEIN FAR1-RELATED SEQUENCE; 1.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 553..589
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 670 AA; 77565 MW; F65BA1E6BDE18E8B CRC64;
MMDGVSLNTD PVVDDDADAD EFEIEGDCGM AKCISQSGVI QGENPLPPVV GMEFDSYEDV
YYFYNCYAKE QGFGVRVSNT WYRKTKERYR GKLSCSSAGF KKKSEANRPR PETRTGCPAM
IKFRLMENKR WRIIEVELDH NHLISAVSGK FYKSHKQLGI GTKRALHLDS AEEVQKVRLF
RTVVIDVEGN GSVEVSSGEF RSSHNQTSQL RLKDGDAQAI HNYFSHLQLI DPNFFYVVDL
NEKGCLRNLF WSNTRSRVAY GYFGDVVAVD TICLTDKYQV PLVSFIGVNH HGQSVLLGCG
LLAGDTIEAC TWLFRAWLTC MLGRPPQVII TDQCRTLQAA VADVFPRAFH CLCLPRIMQK
VPEKLGGLYE YESIRMALNN AVYYSLRPEE FEATWEDMIH HYRLRNHVWL QMLYEDRRQW
VPVYLKEIFL AGMLLTRPNE VVESFFDGYL DKHTSLKEFL DKYDQALQAN HQLEVLADME
SRNSGFMLQS RCYFELQLAK LYTNNILRKF EREVEGMYSC FCTRQINGEG EVITYMVREQ
IEVDGNRREC RDFEVLYNAT EMEVLCVCGL FNFKGYLCRH ALSVLHQNGI EEIPPQYVVS
RWRKDIKRSY VLNHSNGGID INNPVHRYDH LYKCIMQVVE EGRKSEVRYK DTVQALDQIL
RKLNLVEGRL
//
