ID A0A0D2UAE9_GOSRA Unreviewed; 659 AA.
AC A0A0D2UAE9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN ORFNames=B456_010G116000 {ECO:0000313|EMBL:KJB65849.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB65849.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB65849.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR EMBL; CM001749; KJB65849.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2UAE9; -.
DR STRING; 29730.A0A0D2UAE9; -.
DR EnsemblPlants; KJB65849; KJB65849; B456_010G116000.
DR Gramene; KJB65849; KJB65849; B456_010G116000.
DR eggNOG; ENOG502QS51; Eukaryota.
DR OMA; AVYNYFC; -.
DR Proteomes; UP000032304; Chromosome 10.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669:SF88; PROTEIN FAR1-RELATED SEQUENCE; 1.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 544..580
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 16..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..30
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 659 AA; 76376 MW; 172FC36354141505 CRC64;
MEEVCLNSEP VFDMVDEYEG DGEGEGDCSA VEHDDETGSK HSKKEPPLPT IGLEFDSFDE
AYDFYNIYAK EQGFGIRVSN SWFRTKKKER YRAKLSCSSA GFKKKSEANN PRPETRTGCP
AMVVIRLVDS KRWRIVEVEL EHNHQVKMIL AARKARPPAE PVTEIHTIKL YRTAAMDAVS
NGFSNVSERE GIHQPDHSKH LELKEGDAYA VYNFFCRMKL TNPNFFYLMD FDDDGPLKNV
FWADARSRAA YGYFSDTVAI DTTCLTNKYE LPLISFVGVN HHGQSVLLGC GFLGHKSVEY
FVWIFRAWLK CMLGHQPQVI VTDQCKSLQI AVSEVFPKAR HCFCLWYIMQ RVPEKLGGLR
GFEEIKRQLN KAVYNSLKII EFETSWTEMI KKHGLGDNKW LQTLYEERKQ WVPVYLKDTF
FAGMIPIREN ESLNAFFDGY VHKHTSFKEF VDKYDLALYR KHLKEATADV QSKNSSFELK
TRCNFEVQLS KAYTKEIFDK FQSEVEGMYS CFNTRQVTAN GPIITYIVKE RVEIEGNEKE
VRSYEVLFET NQVDIRCICS LFNYKGYLCR HALNVLNYNG VEEVPSRYIL RRWCKDFKFQ
HVDLGSTDID VYGPVYRRSH FHNCAVPIVE GGAQSEEQYK IALHELQELL NKFNLVDDS
//
