ID A0A0D2UFJ3_GOSRA Unreviewed; 540 AA.
AC A0A0D2UFJ3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=Lycopene epsilon-cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_009G032900 {ECO:0000313|EMBL:KJB54410.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB54410.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB54410.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- PATHWAY: Carotenoid biosynthesis. {ECO:0000256|ARBA:ARBA00004829}.
CC -!- SIMILARITY: Belongs to the lycopene cyclase family.
CC {ECO:0000256|ARBA:ARBA00006599}.
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DR EMBL; CM001748; KJB54410.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2UFJ3; -.
DR STRING; 29730.A0A0D2UFJ3; -.
DR EnsemblPlants; KJB54410; KJB54410; B456_009G032900.
DR Gramene; KJB54410; KJB54410; B456_009G032900.
DR eggNOG; ENOG502QT61; Eukaryota.
DR OMA; QTCYGIV; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016860; F:intramolecular oxidoreductase activity; IEA:UniProt.
DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro.
DR GO; GO:0016117; P:carotenoid biosynthetic process; IEA:InterPro.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR010108; Lycopene_cyclase_b/e.
DR NCBIfam; TIGR01790; carotene-cycl; 1.
DR PANTHER; PTHR39757; -; 1.
DR PANTHER; PTHR39757:SF3; LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC; 1.
DR Pfam; PF05834; Lycopene_cycl; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 486..512
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 540 AA; 60428 MW; 9538BF40B8980358 CRC64;
MCLLVSKVIT MECVGARNFA AMAVPTRAFW KANLMRTKTA IPSHNRLISL KVRASGARSE
SCVAVKEDFA DEEDFIKAGG SEILFVQMQQ NKEMDKQSKL ADKLPPISTG ENVLDLVVIG
CGPAGLALAA ESAKLGLNVG LIGPDLPFTN NYGVWEDEFK DLGLERCIEH VWRDTIVYLD
DDKPIMIGRA YGRVSRYLLH EELLRRCIES GVMYLNSKVE TIVEATDGHN LVVCEHNRVV
PCWLATVASG AASGKLLQYE VGGPRVSVQT AYGVEVEVEN NPYDPSLMVF MDYRDYAKQE
VQSLEAQYPT FLYAMPMSST RVFFEKVALQ ETCLASKDAM PFDLLKKKLM SRLESMGIRI
LKVYEEEWSY IPVGGSLPNT EQKNLAFGAA ASMVHPATGY SVVRSLSEAP NYASVIANIL
KKDNSNGLLT SERNNGNISM QAWDTLWPQE RKRQRSFFLF GLALILQLDI EGIRTFFHTF
FRLPSWMWQG FLGSNLSSAD LILFAFYMFV IAPNDMRMSL VRHLISDPTG ATMIRTYLTI
//
