ID A0A0D2UX73_GOSRA Unreviewed; 1484 AA.
AC A0A0D2UX73;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 24.
DE RecName: Full=KOW domain-containing protein {ECO:0000259|SMART:SM00739};
GN ORFNames=B456_011G234600 {ECO:0000313|EMBL:KJB73479.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB73479.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB73479.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001750; KJB73479.1; -; Genomic_DNA.
DR EnsemblPlants; KJB73479; KJB73479; B456_011G234600.
DR Gramene; KJB73479; KJB73479; B456_011G234600.
DR Proteomes; UP000032304; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0006354; P:DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd06081; KOW_Spt5_1; 1.
DR CDD; cd06084; KOW_Spt5_4; 1.
DR CDD; cd09888; NGN_Euk; 1.
DR Gene3D; 2.30.30.30; -; 2.
DR Gene3D; 3.30.70.940; NusG, N-terminal domain; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041973; KOW_Spt5_1.
DR InterPro; IPR041977; KOW_Spt5_4.
DR InterPro; IPR005100; NGN-domain.
DR InterPro; IPR036735; NGN_dom_sf.
DR InterPro; IPR039385; NGN_Euk.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR039659; SPT5.
DR PANTHER; PTHR11125:SF8; PROTEIN RNA-DIRECTED DNA METHYLATION 3; 1.
DR PANTHER; PTHR11125; SUPPRESSOR OF TY 5; 1.
DR Pfam; PF03439; Spt5-NGN; 1.
DR SMART; SM00739; KOW; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 165..192
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 402..429
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 511..538
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT REGION 473..506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 560..1484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 490..505
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 562..577
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 611..627
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 640..697
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 712..756
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 798..822
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 871..888
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 899..950
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..997
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1005..1129
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1145..1176
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1236..1329
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1336..1444
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1462..1478
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1484 AA; 157502 MW; 4260A117726F2472 CRC64;
MEEEPDLNAN NNPWKAHNLP FVPKEEVIEE EFDKMMEERY RDGARFTTFD EDSYEAKGSI
DKNSTMPPSK DPIIWKVKCV VGRERHSAFC LMQKFIDMKS LGTKLQIISA FSVDHIKGFF
YIEADKQCDI NEACKGLTYI YSSRVAPVPS NEVYHLLNVR TKRSEVSKGM WARIKNGKYK
GDLAQVVFVN NDKKRATVKL IPRIDLQAMA AKFGAGVSIN RTVIPAPKLI SSIELEEFRP
LIQFRRDRDT GIGFQILDGM MLKDGYLYKK LSIDSLSCWG VMPTEEELLK FSHSDNNESD
DLEWLSQLYG EKKKKKTTTN EKGGEKGEGS SGFGLDDGFE LYNLVCFSRK DFGLIVGMEK
DDRYKILKEA PEGPVVVTVE KRELKNGPMD TKFTALDHHS KTISISDTVK VLEGQYEGKQ
GIVKQIYRGT IFLYDENETD NGGYFCCKSL KCEKIKQFLD ICSDKGGDPG GTSDFGDFVS
SPKSPISPKK PWHSQDKEAK SDFNRGNRDG MFSIGQTLRI RVGPLKGYLC RVLAVYYSDV
TVKLDSKQKV LTVKNEHLAE VQGKSSAANT NEHDGSSSFK PFDLLGSEGS SGDWLNRAGT
SAEGGGWNAE GSSWPSFSGP GTTQQTETDQ KRDGEDSAWE TKVTPNQNSS WGAAVCSGDN
DKKTDGSSIA WENKTSTKQN SAWAAGGSDQ NASWGSWNKA APKIDSSGGA SDAWGKATSS
GDPSGASKDV GGSWGQSKLE TGNLADSSNI TAWEKDTRIN VGNDGWKKSE SWDNGKNVTE
GSSGAWDKGK GVAEPGSWGK NENSSSDWNN NAVGSNQQGG WGKKNDAGGF EDNSWGKAVE
KLNNKDGTGG SKGNWGSSKL AAEDSKGGWG SASGNDFSGN QTTNWGIKKD ANECAAGGWT
KGGSQNQSDG WGKQHGGSSW GGGASQNAGQ NSGWNSGSGN ANQDSGWAKK NDSDFGSGDA
TKDSSWGKRS DWSSGSADAN QESECGKKSS WGAGSNDAGQ DSGWGKRGSW NSGSGSANED
GWAKKNDSNF GSGDATNDSS WGKKGSADAS QDSNWGKKNW GTGNDSGQDS GWGNKGSWNP
SSSSAGEDSG WGKKSNWNSG SGDANQESGW KPKSDWSSGS GNEDQKEPFS NRGGGSWRGG
FGGRDGSDRG FRGRGDTDRG GFRGRGRSDR GWGRSDRGGF GGRGGDGGGY RGRGGDGGGF
GGRGGDRGGY RGRGGRGGDR GGFGGRGRGR RDQNGGWNNG GDSGENKSFG WNKEGGNQGW
NGGTSGGADQ GGGQSSSWSQ SGGWNKEGGN QGWNGGTSGG GGKSWNQSGA DQGGQSSSWS
QSGGWNKEGG NGGTSGGGAK TWNQSTADQG GQSSSWSQSG GWNKGSSSTN EGGGSQDNNR
KSSNSSDGDK WSSWNQSSGS KEVNESNNQG NGWGKSSTTS AGGWGNQGSG SGDQSQSKTA
DEAPSSGWNK LKDGGENRGN QDPWGKASST STWGQGSGGS KGGW
//
