ID A0A0D2UX81_GOSRA Unreviewed; 1554 AA.
AC A0A0D2UX81;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 30.
DE RecName: Full=KOW domain-containing protein {ECO:0000259|SMART:SM00739};
GN ORFNames=B456_011G234600 {ECO:0000313|EMBL:KJB73481.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB73481.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB73481.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001750; KJB73481.1; -; Genomic_DNA.
DR RefSeq; XP_012454331.1; XM_012598877.1.
DR EnsemblPlants; KJB73481; KJB73481; B456_011G234600.
DR Gramene; KJB73481; KJB73481; B456_011G234600.
DR OrthoDB; 24955at2759; -.
DR Proteomes; UP000032304; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0006354; P:DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd06081; KOW_Spt5_1; 1.
DR CDD; cd06084; KOW_Spt5_4; 1.
DR CDD; cd09888; NGN_Euk; 1.
DR Gene3D; 2.30.30.30; -; 2.
DR Gene3D; 3.30.70.940; NusG, N-terminal domain; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041973; KOW_Spt5_1.
DR InterPro; IPR041977; KOW_Spt5_4.
DR InterPro; IPR005100; NGN-domain.
DR InterPro; IPR036735; NGN_dom_sf.
DR InterPro; IPR039385; NGN_Euk.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR039659; SPT5.
DR PANTHER; PTHR11125:SF8; PROTEIN RNA-DIRECTED DNA METHYLATION 3; 1.
DR PANTHER; PTHR11125; SUPPRESSOR OF TY 5; 1.
DR Pfam; PF03439; Spt5-NGN; 1.
DR SMART; SM00739; KOW; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT DOMAIN 234..261
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 471..498
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 581..608
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 542..576
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 630..1554
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 560..575
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 632..647
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 681..697
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 710..767
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 782..826
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..892
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 941..958
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 969..1020
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1037..1067
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1075..1199
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1215..1246
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1306..1399
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1406..1514
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1532..1548
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1554 AA; 165204 MW; A37AB670D0223DE5 CRC64;
MSSKGKGKGK GKEKEVVYGK RKVSAGRSGG GAEENRRKRK NRGVLQFFED AADVDDNEAS
DDSDFDDYFM EEEPDLNANN NPWKAHNLPF VPKEEVIEEE FDKMMEERYR DGARFTTFDE
DSYEAKGSID KNSTMPPSKD PIIWKVKCVV GRERHSAFCL MQKFIDMKSL GTKLQIISAF
SVDHIKGFFY IEADKQCDIN EACKGLTYIY SSRVAPVPSN EVYHLLNVRT KRSEVSKGMW
ARIKNGKYKG DLAQVVFVNN DKKRATVKLI PRIDLQAMAA KFGAGVSINR TVIPAPKLIS
SIELEEFRPL IQFRRDRDTG IGFQILDGMM LKDGYLYKKL SIDSLSCWGV MPTEEELLKF
SHSDNNESDD LEWLSQLYGE KKKKKTTTNE KGGEKGEGSS GFGLDDGFEL YNLVCFSRKD
FGLIVGMEKD DRYKILKEAP EGPVVVTVEK RELKNGPMDT KFTALDHHSK TISISDTVKV
LEGQYEGKQG IVKQIYRGTI FLYDENETDN GGYFCCKSLK CEKIKQFLDI CSDKVGGDPG
GTSDFGDFVS SPKSPISPKK PWHSQDKEAK SDFNRGNRDG MFSIGQTLRI RVGPLKGYLC
RVLAVYYSDV TVKLDSKQKV LTVKNEHLAE VQGKSSAANT NEHDGSSSFK PFDLLGSEGS
SGDWLNRAGT SAEGGGWNAE GSSWPSFSGP GTTQQTETDQ KRDGEDSAWE TKVTPNQNSS
WGAAVCSGDN DKKTDGSSIA WENKTSTKQN SAWAAGGSDQ NASWGSWNKA APKIDSSGGA
SDAWGKATSS GDPSGASKDV GGSWGQSKLE TGNLADSSNI TAWEKDTRIN VGNDGWKKSE
SWDNGKNVTE GSSGAWDKGK GVAEPGSWGK NENSSSDWNN NAVGSNQQGG WGKKNDAGGF
EDNSWGKAVE KLNNKDGTGG SKGNWGSSKL AAEDSKGGWG SASGNDFSGN QTTNWGIKKD
ANECAAGGWT KGGSQNQSDG WGKQHGGSSW GGGASQNAGQ NSGWNSGSGN ANQDSGWAKK
NDSDFGSGDA TKDSSWGKRS DWSSGSADAN QESECGKKSS WGAGSNDAGQ DSGWGKRGSW
NSGSGSANED GWAKKNDSNF GSGDATNDSS WGKKGSADAS QDSNWGKKNW GTGNDSGQDS
GWGNKGSWNP SSSSAGEDSG WGKKSNWNSG SGDANQESGW KPKSDWSSGS GNEDQKEPFS
NRGGGSWRGG FGGRDGSDRG FRGRGDTDRG GFRGRGRSDR GWGRSDRGGF GGRGGDGGGY
RGRGGDGGGF GGRGGDRGGY RGRGGRGGDR GGFGGRGRGR RDQNGGWNNG GDSGENKSFG
WNKEGGNQGW NGGTSGGADQ GGGQSSSWSQ SGGWNKEGGN QGWNGGTSGG GGKSWNQSGA
DQGGQSSSWS QSGGWNKEGG NGGTSGGGAK TWNQSTADQG GQSSSWSQSG GWNKGSSSTN
EGGGSQDNNR KSSNSSDGDK WSSWNQSSGS KEVNESNNQG NGWGKSSTTS AGGWGNQGSG
SGDQSQSKTA DEAPSSGWNK LKDGGENRGN QDPWGKASST STWGQGSGGS KGGW
//
