ID A0A0D2V6T5_GOSRA Unreviewed; 520 AA.
AC A0A0D2V6T5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=UBC core domain-containing protein {ECO:0000259|PROSITE:PS50127};
GN ORFNames=B456_010G070800 {ECO:0000313|EMBL:KJB64895.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB64895.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB64895.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001749; KJB64895.1; -; Genomic_DNA.
DR RefSeq; XP_012450473.1; XM_012595019.1.
DR AlphaFoldDB; A0A0D2V6T5; -.
DR STRING; 29730.A0A0D2V6T5; -.
DR EnsemblPlants; KJB64895; KJB64895; B456_010G070800.
DR GeneID; 105773272; -.
DR Gramene; KJB64895; KJB64895; B456_010G070800.
DR KEGG; gra:105773272; -.
DR eggNOG; KOG0417; Eukaryota.
DR OMA; QTAPLRW; -.
DR OrthoDB; 1218987at2759; -.
DR Proteomes; UP000032304; Chromosome 10.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR CDD; cd00195; UBCc; 1.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 1.
DR InterPro; IPR000608; UBQ-conjugat_E2.
DR InterPro; IPR023313; UBQ-conjugating_AS.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR PANTHER; PTHR24068; UBIQUITIN-CONJUGATING ENZYME E2; 1.
DR PANTHER; PTHR24068:SF159; UBIQUITIN-CONJUGATING ENZYME E2 T; 1.
DR Pfam; PF00179; UQ_con; 1.
DR SMART; SM00212; UBCc; 1.
DR SUPFAM; SSF54495; UBC-like; 1.
DR PROSITE; PS00183; UBC_1; 1.
DR PROSITE; PS50127; UBC_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 6..161
FT /note="UBC core"
FT /evidence="ECO:0000259|PROSITE:PS50127"
FT REGION 242..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 303..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 470..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 244..259
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..349
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 470..492
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 95
FT /note="Glycyl thioester intermediate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU10133"
SQ SEQUENCE 520 AA; 57829 MW; AA8AC208D49F9F49 CRC64;
MAQEARLKLR MQKELKLLLV DPPHGASFPT LSSQSDITDL SSIHAQIEGP EETVYSKGIF
KIKIQIPERY PLQPPIVTFA TPIYHPNIDN GGRICLDILN LPPKGAWQPS LNISTVLTSI
RLLLSEPNPD DGLMCEASRE YKYNRQAFDQ KARSMTEKYA KAGAGESSCS YQCTETKVDS
TMVEVQGLDL ASNHGALELS PSNKRTHGIS QKLSLESTIL NKKKDADRKV PNHNLFLSAS
GTQMECKRKR EKENDVLSGY NLNHEKVNGK GRKSSSIVSG QCKDDFDNKE NVDPNYLSSL
YQHQASSESS FSQASHNQQL DLHEDGNSAN SSTKSSSKLC QSQKDPFGSM EPMQTFEKVK
ILGTVEESHV DRAENISANK KTEKLSSVGK KLSLGLKGSS HRQQVNNKEN VMPVQNLPYS
KPQTLEKKGL GRKLSLIPST QQLQQGCRGD QKPQSHQVVQ SMQADVEVKE KGAEEMEQES
SISEKVVVLD SEDSEGENQT APLRWRVPLA ARKRLGRWRV
//
