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Database: UniProt
Entry: A0A0D2VIU9_GOSRA
LinkDB: A0A0D2VIU9_GOSRA
Original site: A0A0D2VIU9_GOSRA 
ID   A0A0D2VIU9_GOSRA        Unreviewed;      1462 AA.
AC   A0A0D2VIU9;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   31-JUL-2019, entry version 21.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJB82944.1};
GN   ORFNames=B456_013G221400 {ECO:0000313|EMBL:KJB82944.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
OC   Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB82944.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB82944.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J.,
RA   Grover C., Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T.,
RA   Marler B.S., Page J.T., Roberts A.W., Romanel E., Sanders W.S.,
RA   Szadkowski E., Tan X., Tang H., Xu C., Wang J., Wang Z., Zhang D.,
RA   Zhang L., Ashrafi H., Bedon F., Bowers J.E., Brubaker C.L., Chee P.W.,
RA   Das S., Gingle A.R., Haigler C.H., Harker D., Hoffmann L.V., Hovav R.,
RA   Jones D.C., Lemke C., Mansoor S., ur Rahman M., Rainville L.N.,
RA   Rambani A., Reddy U.K., Rong J.K., Saranga Y., Scheffler B.E.,
RA   Scheffler J.A., Stelly D.M., Triplett B.A., Van Deynze A.,
RA   Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J., Zaki E.A.,
RA   Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
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DR   EMBL; CM001752; KJB82944.1; -; Genomic_DNA.
DR   STRING; 29730.Gorai.013G221400.1; -.
DR   EnsemblPlants; KJB82944; KJB82944; B456_013G221400.
DR   Gramene; KJB82944; KJB82944; B456_013G221400.
DR   OMA; DTKEECE; -.
DR   Proteomes; UP000032304; Chromosome 13.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR   GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00593; RIBOc; 2.
DR   Gene3D; 1.10.1520.10; -; 2.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003100; PAZ_dom.
DR   InterPro; IPR036085; PAZ_dom_sf.
DR   InterPro; IPR000999; RNase_III_dom.
DR   InterPro; IPR036389; RNase_III_sf.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF02170; PAZ; 1.
DR   Pfam; PF00636; Ribonuclease_3; 2.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00949; PAZ; 1.
DR   SMART; SM00535; RIBOc; 2.
DR   SUPFAM; SSF101690; SSF101690; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   SUPFAM; SSF69065; SSF69065; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50821; PAZ; 1.
DR   PROSITE; PS00517; RNASE_3_1; 2.
DR   PROSITE; PS50142; RNASE_3_2; 2.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000032304};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW   RNA-mediated gene silencing {ECO:0000256|SAAS:SAAS00703041}.
FT   DOMAIN       73    218       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      391    537       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   DOMAIN      779    867       PAZ. {ECO:0000259|PROSITE:PS50821}.
FT   DOMAIN      919    968       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   DOMAIN     1085   1218       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   REGION       34     54       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION     1327   1347       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS   1328   1347       Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   1462 AA;  164995 MW;  EE381F30C3331368 CRC64;
     MHSPMEEEQC YPLKTTFSET HLHPSQIMVS INDDHAKNHH PSSSSNPDHS SPRGHQLQVV
     RYKMIAVMLI KDFVQPINSI DKKKLIIFLA PTVHLVNQQF EYIKFHTSLD VEQYYGDKGV
     NEWNSGYWEK DIKEHDVLVM TPQILLDALW KAFLSLEMVS LMIIDECHHA TGNHPYAKIM
     KEFYHKSNNK PKIFGMTASP LVSKGALSNN DCEDQLSELE NVMDCMIYAI EDMTEMETYV
     PTAKESCRFF DPTRFCSSGL KAMIEASWLK IDASLSTLQG SIQTSYTDMD DKFKALHKRS
     SNDHAKILHC LDDLGLICAY EAVKVCLENI PDTKEECEAY KEGVLQCKRF LNEVLQIIRE
     SLPLGDENFL NSGFDYLKAV DSGYISPKLH ELIEFFLSLG EPSQVLCLVF VERIVTAKVI
     ERFVKKVSCL SCFVVSCLTG SNTSVDSMAP KIQKETLEYF MVNDCGEGIH IPNCSYVIRF
     DLPKTVLSYV QSRGRARQSG SQFIMILERG NEKQRDQLYD LIRSEHSMTN TAMNRDPDLS
     LPENRTLEET NVSIVAATGA SIEETSKNRC ASKGKDPIFD SGTTRWKELH GTTQIRAFSG
     SWGEKADASV FFAYKIDFSC NVVSVVYSGF LTDDVGNIEV DLYLIGKIAK ARVSFYGKVH
     LDAVQITAAK RFQEIFFNGL FGRLFVGSSR TSRELLFHSK TSLLWHPFNM YLLLPLEDSL
     SNELRINWPG ITACTLAVEF LTADGNRGNP SLNQTDSSVT EHKETNVIHF ANRSIDVNNI
     SNIVVLAIHT GRIYSTIELV HDTSAKSSFN DIVDMNSLKF ATFSEYYNRK YCIVLKHPGQ
     PLLLLKQSHN PHNLLVDFND EGCRFSAQAL QASSVNEKSW NTIHMPPKLL LILDVPVYVL
     KAFYLLPSLM HRLESLMLAS QLREEIDFRS SNFDIPSSMI LEALTTLRCC ESFSMERLEF
     LGDSVLKYAG YIRDSAFDPR RWVAPGQLRL RSFPCNCRVD SREVPLDKKF QTEDLEIKVS
     ISCDRGHRWM CSKTISDCVE ALIGAYYVSG GLIAALHMMK WLGIDAELDP SLVAEAINRA
     SLQSYKFSMK FFLQEALTHA SANEFYCYQR LEFLGDSVLD LLITRYLYCN HTDIDSGELT
     DLRSASVSNE TFAQVAVRND LHKHLRHCST LLLDQISEYA QSLPESWDTT RSVPGIKGPK
     ICSNLIESIV AAILIDTNLN LDEVWRIVEP LLSLIVTPDK LEEKCVNTGE MVHAKLWLQL
     DDILLVGEAF NRSKKVAKGK AALYLLKELE DRGISRKRTK QDHAGSSGTT DDDLLEPKMC
     KKQRIAEIPS PTNDSSRTAY GAEIPSPANA SSRTAYVIAR INTNKGRPRA TLYEICRKQL
     WPRPTFETTE GRSRSPMEIG KGADRKIGFN SFVTKITLNG PSSGIIECSG DVRADKKSSC
     DSAAILMLYR LKELGKLIIR ES
//
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