ID   A0A0D2X0F9_CAPO3        Unreviewed;       313 AA.
AC   A0A0D2X0F9;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   SubName: Full=Polymyositis/scleroderma autoantigen 1 {ECO:0000313|EMBL:KJE88989.1};
GN   ORFNames=CAOG_000553 {ECO:0000313|EMBL:KJE88989.1};
OS   Capsaspora owczarzaki (strain ATCC 30864).
OC   Eukaryota; Filasterea; Capsaspora.
OX   NCBI_TaxID=595528 {ECO:0000313|EMBL:KJE88989.1, ECO:0000313|Proteomes:UP000008743};
RN   [1] {ECO:0000313|Proteomes:UP000008743}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ATCC 30864 {ECO:0000313|Proteomes:UP000008743};
RA   Russ C., Cuomo C., Burger G., Gray M.W., Holland P.W.H., King N.,
RA   Lang F.B.F., Roger A.J., Ruiz-Trillo I., Young S.K., Zeng Q., Gargeya S.,
RA   Alvarado L., Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M.,
RA   Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., Howarth C.,
RA   Mehta T., Neiman D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N.,
RA   Sisk P., Stolte C., Sykes S., White J., Yandava C., Haas B., Nusbaum C.,
RA   Birren B.;
RT   "The Genome Sequence of Capsaspora owczarzaki ATCC 30864.";
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   -!- SIMILARITY: Belongs to the RNase PH family.
CC       {ECO:0000256|ARBA:ARBA00006678}.
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DR   EMBL; KE346360; KJE88989.1; -; Genomic_DNA.
DR   RefSeq; XP_004365424.1; XM_004365367.2.
DR   AlphaFoldDB; A0A0D2X0F9; -.
DR   STRING; 595528.A0A0D2X0F9; -.
DR   EnsemblProtists; KJE88989; KJE88989; CAOG_000553.
DR   GeneID; 14902257; -.
DR   eggNOG; KOG1614; Eukaryota.
DR   InParanoid; A0A0D2X0F9; -.
DR   OMA; VCSIQKA; -.
DR   OrthoDB; 128403at2759; -.
DR   PhylomeDB; A0A0D2X0F9; -.
DR   Proteomes; UP000008743; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0000178; C:exosome (RNase complex); IEA:InterPro.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd11368; RNase_PH_RRP45; 1.
DR   Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR   InterPro; IPR001247; ExoRNase_PH_dom1.
DR   InterPro; IPR015847; ExoRNase_PH_dom2.
DR   InterPro; IPR036345; ExoRNase_PH_dom2_sf.
DR   InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR   InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR   InterPro; IPR033100; Rrp45.
DR   PANTHER; PTHR11097:SF14; EXOSOME COMPLEX COMPONENT RRP45; 1.
DR   PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR   Pfam; PF01138; RNase_PH; 1.
DR   Pfam; PF03725; RNase_PH_C; 1.
DR   SUPFAM; SSF55666; Ribonuclease PH domain 2-like; 1.
DR   SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008743}.
FT   DOMAIN          32..163
FT                   /note="Exoribonuclease phosphorolytic"
FT                   /evidence="ECO:0000259|Pfam:PF01138"
FT   DOMAIN          198..264
FT                   /note="Exoribonuclease phosphorolytic"
FT                   /evidence="ECO:0000259|Pfam:PF03725"
SQ   SEQUENCE   313 AA;  34578 MW;  A9EB5D2E65947FAB CRC64;
     MKDTPLSNNE RSFVQGAMKS GLRVDGRGVY DFRRIRIAYQ PERGHVEVQL GRTRVMVQVS
     CELTKPFPDR PAEGAVQFNV ELSPMASPAF EPGRPSEQAI ELSRMVERVV KDSNAIDTTS
     LCVISGEAVW NIRVDLHALD HDGNLSDALC MAALAGLIHF RKPEVSMPSL SSGDESVAGN
     LIIHDVRERE PLPLSVHHMP LCVTFAFLDD GEHMVVDPTF QEERVAEGYL IVAMNIHREV
     CAVHKHGSVL LDASQISRCT KIAAIKVAEM TELLQKSIDE EEQLRANRRA GKAPAAAKSN
     KSTIFEYQGS IVQ
//