ID A0A0D2ZRQ1_BRAOL Unreviewed; 406 AA.
AC A0A0D2ZRQ1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=COP9 signalosome complex subunit 4 {ECO:0000256|ARBA:ARBA00014881};
GN Name=106320256 {ECO:0000313|EnsemblPlants:Bo00861s020.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo00861s020.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo00861s020.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TO1000 {ECO:0000313|EnsemblPlants:Bo00861s020.1};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo00861s020.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CSN4 family.
CC {ECO:0000256|ARBA:ARBA00010417}.
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DR RefSeq; XP_013614075.1; XM_013758621.1.
DR AlphaFoldDB; A0A0D2ZRQ1; -.
DR STRING; 109376.A0A0D2ZRQ1; -.
DR EnsemblPlants; Bo00861s020.1; Bo00861s020.1; Bo00861s020.
DR GeneID; 106320256; -.
DR Gramene; Bo00861s020.1; Bo00861s020.1; Bo00861s020.
DR KEGG; boe:106320256; -.
DR eggNOG; KOG1497; Eukaryota.
DR HOGENOM; CLU_028132_1_0_1; -.
DR OMA; HFIHHIL; -.
DR OrthoDB; 5476188at2759; -.
DR Proteomes; UP000032141; Unassembled WGS sequence.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR040134; PSMD12/CSN4.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10855; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR PANTHER; PTHR10855:SF2; COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR Pfam; PF01399; PCI; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 206..374
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
SQ SEQUENCE 406 AA; 46079 MW; 8A787C47C01924EB CRC64;
MEEALRNASA ISDQRQKIEQ YKLILSSVIS SNDLLQSKHF IHHILSDDVP LVVSRQLLQS
FAQELGRLEA ETQKEIALFT LTQIQPRVVS FEEQALVIRE KLAALYESEQ EWSRAAQMLS
GIDLDSGMRA VDENFKLSKC IQIARLYLEH YSGSLILLCS DAVNAETYIN KASFLVSSSQ
NEVLNLQYKV CYARILDMKR KFLEAALRYY GISQIEQRHI GDEEIDENAL EQALSAAVTC
TILAGAGPQR SRVLATLYKD ERCSKLKIYP ILQKVYLERI LRKPEIDAFA EELRPHQKAY
LPDKSTVLDR AMIEHNLLSA SKLYTNIRFD ELGTLLGIDP IKAEKIASNM ICQDRMRGSI
DQEEAVIHFE DDIEELQQWD DQISGVCQAL NDILDGMAKK GLPVPV
//
