ID A0A0D3A7N7_BRAOL Unreviewed; 700 AA.
AC A0A0D3A7N7;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 33.
DE RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN Name=106308935 {ECO:0000313|EnsemblPlants:Bo1g054850.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo1g054850.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo1g054850.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo1g054850.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013601492.1; XM_013746038.1.
DR AlphaFoldDB; A0A0D3A7N7; -.
DR STRING; 109376.A0A0D3A7N7; -.
DR EnsemblPlants; Bo1g054850.1; Bo1g054850.1; Bo1g054850.
DR GeneID; 106308935; -.
DR Gramene; Bo1g054850.1; Bo1g054850.1; Bo1g054850.
DR KEGG; boe:106308935; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_018319_0_0_1; -.
DR OMA; KCAERAN; -.
DR OrthoDB; 904281at2759; -.
DR Proteomes; UP000032141; Chromosome C1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF11; SMR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR SMART; SM00463; SMR; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 9.
DR PROSITE; PS50828; SMR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 172..206
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 207..241
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 242..276
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 277..311
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 312..346
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 347..381
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 382..416
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 418..452
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..487
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 601..686
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REGION 62..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 700 AA; 78284 MW; 8D0238264B37364E CRC64;
MSFHLYSSPS SLLHDPHPLC NLLSAHPKST PRSFLSTYNP NSPPFHSRNL LQTSHVSLQE
SLPHETQIEK PKLDANPPGP TPKRYAWVNP NSPRASQLRR KSYDSRYSSL IKLAESLDAC
PPNEADVSYE LTKFGSNLFE QDAVVTLNNM TNPETAPLVL NHLLGTLEPT REVILYNVTM
KVFRKSKDLE RSEKLFDEML QRGVKPDNAT FTTLISCARQ CGLPKRAVEW FEKMPSFGCE
PDNVTLATMI DAYGRAGNVE MALSLYDRAR TEKWRIDPVT FSTLIRIYGY SGNYDGCLNI
YEEMKSLGVK PNLVIYNRLL DSMGKAKRPW QATIIHKDLI SNGFEPNWST YAALIRAYGR
ARYGDDALVI YRQMKGKGME LTVILYNTLL SMCADIGYVD EAFEIFQDMK SSGTCDPDSW
TFSSLVTVYS CCGRVSEAEA ALREMREAGF EPTLFVLTSL IQCYGKAKQV DDVVRTFEQV
LELGIEPDDR FCGCLLNVMT QTPKEEIGKL IGCVEKAKPK LGRVVKMLIE EESCEEGVFK
KEASELIDSI GSDVNKAYLN CLIDLCVNLN KLEKACEILQ LGLEYDIYSG LQSKSATQWS
LHLKSLSLGA ALTALHVWMN DLSEAALVSG EEFPPLLGIN TGHGKHKYSD KGLAAVFESH
LKELDAPFHE APDKVGWFLT TSVAAKAWLE SRRLSGEVSA
//