ID A0A0D3AJS1_BRAOL Unreviewed; 505 AA.
AC A0A0D3AJS1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106323234 {ECO:0000313|EnsemblPlants:Bo2g016520.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo2g016520.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo2g016520.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo2g016520.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013616837.1; XM_013761383.1.
DR AlphaFoldDB; A0A0D3AJS1; -.
DR EnsemblPlants; Bo2g016520.1; Bo2g016520.1; Bo2g016520.
DR GeneID; 106323234; -.
DR Gramene; Bo2g016520.1; Bo2g016520.1; Bo2g016520.
DR KEGG; boe:106323234; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR OMA; ASEPCRF; -.
DR OrthoDB; 2056457at2759; -.
DR Proteomes; UP000032141; Chromosome C2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF266; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 193..227
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 229..264
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 265..299
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 300..334
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 335..369
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 370..405
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 406..440
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 25..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 505 AA; 56964 MW; 8CBEA1103E7A0C05 CRC64;
MRLPTPIINE SRRLSSSSRS WISPISLIKK KPDPPPESSI SQVDLNPKPQ FISHESAINL
IKRERDPQRA LDLFNKASQQ KGFNHNSATY SVLLDNLLRH KKLNAVDAIL RQMKHETCRF
QEGLFLNLMR HFSRFELHDK VIEMFGLIQV IARVKPSLNA VSTCLNLLVD SKEVGLAKKL
LLYGKKNLGL QPNTCIFNIL VKHHCKNKDV DSAFGVVEEM KRSGLSYPNL ITYSTLMECL
FVQSRSKEAM ELFEDMISKE GISPDPVMFN VMINGFCREG EVERGKMIIE FMKKNGCNPN
VYNYSALMNG FCKEGRAQEA KEVFDEVKET GLKLDTVGYT TLMNCFCRNG QVDEAMELLG
EMKASGCRAD ALTYNVILRG LCGEGRTEEA LEMLGRWGCV EGVHLNKGSY RIILNALCKN
GELEKAVEFL SLMSKKGVWP HHGTWNELVV RLCGSGNAEM GIRVLTGFVG MGFKPEPESW
RAVVESICKE RKLLHVFEVL DSLVS
//
