ID A0A0D3AY80_BRAOL Unreviewed; 977 AA.
AC A0A0D3AY80;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=Ribonuclease {ECO:0000256|PIRNR:PIRNR017179};
GN Name=106327358 {ECO:0000313|EnsemblPlants:Bo2g161630.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo2g161630.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo2g161630.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo2g161630.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Cytoprotective ribonuclease (RNase) required for resistance
CC to abiotic stresses, acting as a positive regulator of mRNA decapping
CC during stress. {ECO:0000256|PIRNR:PIRNR017179}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR017179}.
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DR RefSeq; XP_013620952.1; XM_013765498.1.
DR AlphaFoldDB; A0A0D3AY80; -.
DR STRING; 109376.A0A0D3AY80; -.
DR EnsemblPlants; Bo2g161630.1; Bo2g161630.1; Bo2g161630.
DR GeneID; 106327358; -.
DR Gramene; Bo2g161630.1; Bo2g161630.1; Bo2g161630.
DR eggNOG; KOG2039; Eukaryota.
DR HOGENOM; CLU_005966_2_0_1; -.
DR OMA; EKTCCTV; -.
DR OrthoDB; 375531at2759; -.
DR Proteomes; UP000032141; Chromosome C2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016442; C:RISC complex; IEA:UniProtKB-UniRule.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:InterPro.
DR CDD; cd20443; Tudor_AtTudor1-like; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 2.40.50.90; -; 5.
DR InterPro; IPR016685; Silence_cplx_Nase-comp_TudorSN.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR016071; Staphylococal_nuclease_OB-fold.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR047395; Tudor_AtTudor1-like.
DR PANTHER; PTHR12302; EBNA2 BINDING PROTEIN P100; 1.
DR PANTHER; PTHR12302:SF2; STAPHYLOCOCCAL NUCLEASE DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF00565; SNase; 5.
DR Pfam; PF00567; TUDOR; 1.
DR PIRSF; PIRSF017179; RISC-Tudor-SN; 1.
DR SMART; SM00318; SNc; 4.
DR SMART; SM00333; TUDOR; 1.
DR SUPFAM; SSF50199; Staphylococcal nuclease; 5.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR PROSITE; PS50830; TNASE_3; 5.
DR PROSITE; PS50304; TUDOR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|PIRNR:PIRNR017179};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 6..150
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 185..364
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 378..546
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 576..703
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 723..958
FT /note="TNase-like"
FT /evidence="ECO:0000259|PROSITE:PS50830"
FT DOMAIN 770..835
FT /note="Tudor"
FT /evidence="ECO:0000259|PROSITE:PS50304"
FT REGION 225..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 955..977
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 977 AA; 106734 MW; F5316643D713CE31 CRC64;
MASEDQWFKG RVKAVTSGDC LVITALAQSR PGPPPEKTIT LSSLIAPKLA RRGGIDEPFA
WESREFLRKL CIGKEIAFKV DYKVEAIGRE FGSVYLGSEN LAKLVVQNGW AKVREPGGQQ
NQDKVLKPYI EELLQVEEMA KQEGLGRWSK VPGAAEASVR NLPPSAVGDS GDFDAMGLLA
ASKGKPMEAI VEQVRDGSTI RVYLLPEFQF VQVFVAGLQA PSMGRRSTQE TVVEPDVTSA
PNGDASAEPR GPLTSAQRLV ASAVSSVEVS SDPFAMEAKY FTELRVLNRD VRIVLEGVDK
FNNLIGSVYY SVGETVKDLG LELVENGLAK YVEWSANMME EEAKKKLKAA ELQCKKNRVK
MWSNYVPPAS NSKAIHDQNF TGKVVEVVSG DCLVVADDSV PFGSPMAERR VCLSSIRSPK
IGNPRREEKP APYAREAKEF LRQKLIGKQV NVQMEYQRKI SPADGATTSG AGDSRVMDFG
SVFLPSATKG DAAAATPGVN IAELIIARGL GTVVRHRDFE ERSNHYEALL AAEARAIAGK
KGIQSAKDSP AMHVTDLTVA SAKKAKDFLP SLHRSRRISA VVEYVLSGHR FKLYIPKETC
SIAFAFSGVR CPGRGEPYSE EAIALMRRKI MQRDVEIEIE TVDRTGTFLG SMWEGKTNAA
MFLLEAGVAK MQTGFGADRI PEAHLLELAE RSAKNQKLKI WENYVEGEEV VDGGSKVETR
QKETLKVVVT EVLGGGRFYV QTVGDQKVAS IQNQLASLSL GDAPIVGSFN PKKGDIVLAQ
FSLDNSWNRA MIVNAPRGAV QSPEDKLEVF YIDYGNQETV PYSAIRPVEA SVSSAPGLAQ
LCRLAYLKVP SLEEDFGPEA GEYLHSVTLG SGKEFKAVVE ERDTSGGKVK GQGTGTELAV
TLIAVDDEIS VNAAMLQEGI ARMEKRKRWE HKDKKAALDA LEKYQEEARK SRTGIWQYGD
IQSDDEDSVP VRKPGRG
//
