ID A0A0D3B0E9_BRAOL Unreviewed; 472 AA.
AC A0A0D3B0E9;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 35.
DE RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g005340.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g005340.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g005340.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the proteasome subunit p55 family.
CC {ECO:0000256|ARBA:ARBA00006397}.
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DR AlphaFoldDB; A0A0D3B0E9; -.
DR STRING; 109376.A0A0D3B0E9; -.
DR EnsemblPlants; Bo3g005340.1; Bo3g005340.1; Bo3g005340.
DR Gramene; Bo3g005340.1; Bo3g005340.1; Bo3g005340.
DR eggNOG; KOG1498; Eukaryota.
DR HOGENOM; CLU_033860_2_0_1; -.
DR OMA; FICKHYR; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR040134; PSMD12/CSN4.
DR InterPro; IPR040896; RPN5_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10855:SF1; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; 1.
DR PANTHER; PTHR10855; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF18098; RPN5_C; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 262..433
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
SQ SEQUENCE 472 AA; 54460 MW; C185761D9174CC4E CRC64;
MASFRLLRSV LFPFLISNFC NLIRFIVWIF QGESGKLQAS VDRLLNEEKQ MRLAENVAGT
RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETKIE
LIKTLNNVSA GKIYVEIERA RLTRKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI
AFILEQVRLC LDRQDYVRAQ ILSRKINPRV FDADTKKDNK KPKEGENIVE EAPADIPTLL
ELKRIYYELM IRYYSHNNEY LEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD
PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV TMEVIQWTAL WNKYKDEFEK EKSLVGGSLG
DKAGEDLKLR IIEHNILVVS KYYSRITLKR LAELLCLSIE EAEKHLSEMV VSKALIAKID
RPSGIVCFQV AKDSNEILNS WAVNLEKLLD LVEKSCHQIH KETMVHKAVL RS
//