ID   A0A0D3B5S5_BRAOL        Unreviewed;       707 AA.
AC   A0A0D3B5S5;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 32.
DE   RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=106329219 {ECO:0000313|EnsemblPlants:Bo3g033010.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g033010.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo3g033010.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo3g033010.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   RefSeq; XP_013623292.1; XM_013767838.1.
DR   RefSeq; XP_013623293.1; XM_013767839.1.
DR   AlphaFoldDB; A0A0D3B5S5; -.
DR   STRING; 109376.A0A0D3B5S5; -.
DR   EnsemblPlants; Bo3g033010.1; Bo3g033010.1; Bo3g033010.
DR   GeneID; 106329219; -.
DR   Gramene; Bo3g033010.1; Bo3g033010.1; Bo3g033010.
DR   KEGG; boe:106329219; -.
DR   eggNOG; KOG1246; Eukaryota.
DR   HOGENOM; CLU_000991_8_2_1; -.
DR   OMA; WIVQEHT; -.
DR   OrthoDB; 1205686at2759; -.
DR   Proteomes; UP000032141; Chromosome C3.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR003349; JmjN.
DR   InterPro; IPR004198; Znf_C5HC2.
DR   PANTHER; PTHR10694:SF123; JMJC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR   Pfam; PF02373; JmjC; 1.
DR   Pfam; PF02375; JmjN; 1.
DR   Pfam; PF02928; zf-C5HC2; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SMART; SM00545; JmjN; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   PROSITE; PS51184; JMJC; 1.
DR   PROSITE; PS51183; JMJN; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          138..179
FT                   /note="JmjN"
FT                   /evidence="ECO:0000259|PROSITE:PS51183"
FT   DOMAIN          316..477
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
FT   REGION          1..63
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..16
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   707 AA;  79539 MW;  F829CF4907378976 CRC64;
     MGIEGGNTSS KSGNVDKFLS PPPGFEGCSK SVNVDKLLSP PPGFEGVNRS SKSGNVDKLL
     SPPPGFESQA RFVLRKVQEK TNGFRPGDAD SFQKLLNRRP WIVQEHTTPS SGVLKTTKPE
     VQPRRLRRVS KKIVLEEASV FNPTEKEFND TLSYIASLRD ISEPHGICCV VPPPSWDPPC
     LLGERQIWEG SRFFTQVQIF DGVHTDDPKI KKETDADSDD DDTFHKVKFC KTELGNEYTL
     EIFKNFADSY LESHFRLKEK VKDAWPTVAD VEKEFRKLLE NPFVELGVLY GNNIDTKTFG
     SGFPLSGSSE SCKYKTSGWN LNNTAKLPGS LLTFDDCESV CVPRLSVGMC LSSQLWKSEK
     ERLYSLFYLH TGAPRVWYSV AGCHRYKFKA FMESFVPKVS GEQSKKSYDS VMAMSPYALH
     MEGIPVTRCV QNRGQYVILF PGTYYSAVDC GFNCLEIANF ATLDWLPHKE IDALQNQEKK
     IKSLLSYDKL LFGAASEAVK CLKEYSLTKK ETADNMRWFN ACGKEGMFSN TVKSRVKKEK
     SRVQYLSGPL KPQRMEESFD DVSKRACCVC FVDLHLSAVQ CSCSADRYSC LSHMRNLCAC
     PYDKKSFLYR YTIDELNILA EALEQRKLSC MFKWGNIDGN YCASPAIRSS QAGGDKGKTT
     DEVMQDAETG GKEQMKARGK VRSIIEIMNV KEENDNESGT VDPKPLF
//