ID A0A0D3B966_BRAOL Unreviewed; 236 AA.
AC A0A0D3B966;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 31.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN Name=106331587 {ECO:0000313|EnsemblPlants:Bo3g054820.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g054820.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g054820.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g054820.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_013625428.1; XM_013769974.1.
DR AlphaFoldDB; A0A0D3B966; -.
DR STRING; 109376.A0A0D3B966; -.
DR EnsemblPlants; Bo3g054820.1; Bo3g054820.1; Bo3g054820.
DR GeneID; 106331587; -.
DR Gramene; Bo3g054820.1; Bo3g054820.1; Bo3g054820.
DR eggNOG; KOG0439; Eukaryota.
DR HOGENOM; CLU_036554_1_2_1; -.
DR OMA; VTKYMGY; -.
DR OrthoDB; 122649at2759; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809:SF6; AT11025P-RELATED; 1.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR PIRSF; PIRSF019693; VAMP-associated; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 211..232
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 6..127
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT REGION 131..153
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 176..203
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 236 AA; 26187 MW; 08C463305FABBECE CRC64;
MTTGDLVNIH PTELKFPFEL KKQSSCSLQI SNKTSTQVVA FKVKTTNPRK YCVRPNTGVV
LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QSVIVSDATT SKDVIAEMFN KEPGRVIEDF
KLRVVYIPAN PPSPVPEGSE EGNSPRTDFP ASQFDDHVSR TLEETNEKSS EAWSMIHKLT
EEKACAVQQS QKLRQELEML RRESSKKQSG GGHSLVLMLL VGLLGCVIGY ILNVRT
//