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Database: UniProt
Entry: A0A0D3B966_BRAOL
LinkDB: A0A0D3B966_BRAOL
Original site: A0A0D3B966_BRAOL 
ID   A0A0D3B966_BRAOL        Unreviewed;       236 AA.
AC   A0A0D3B966;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 31.
DE   RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN   Name=106331587 {ECO:0000313|EnsemblPlants:Bo3g054820.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g054820.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo3g054820.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo3g054820.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC       family. {ECO:0000256|ARBA:ARBA00008932}.
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DR   RefSeq; XP_013625428.1; XM_013769974.1.
DR   AlphaFoldDB; A0A0D3B966; -.
DR   STRING; 109376.A0A0D3B966; -.
DR   EnsemblPlants; Bo3g054820.1; Bo3g054820.1; Bo3g054820.
DR   GeneID; 106331587; -.
DR   Gramene; Bo3g054820.1; Bo3g054820.1; Bo3g054820.
DR   eggNOG; KOG0439; Eukaryota.
DR   HOGENOM; CLU_036554_1_2_1; -.
DR   OMA; VTKYMGY; -.
DR   OrthoDB; 122649at2759; -.
DR   Proteomes; UP000032141; Chromosome C3.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR000535; MSP_dom.
DR   InterPro; IPR008962; PapD-like_sf.
DR   InterPro; IPR016763; VAP.
DR   PANTHER; PTHR10809:SF6; AT11025P-RELATED; 1.
DR   PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR   Pfam; PF00635; Motile_Sperm; 1.
DR   PIRSF; PIRSF019693; VAMP-associated; 1.
DR   SUPFAM; SSF49354; PapD-like; 1.
DR   PROSITE; PS50202; MSP; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        211..232
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          6..127
FT                   /note="MSP"
FT                   /evidence="ECO:0000259|PROSITE:PS50202"
FT   REGION          131..153
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          176..203
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   236 AA;  26187 MW;  08C463305FABBECE CRC64;
     MTTGDLVNIH PTELKFPFEL KKQSSCSLQI SNKTSTQVVA FKVKTTNPRK YCVRPNTGVV
     LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QSVIVSDATT SKDVIAEMFN KEPGRVIEDF
     KLRVVYIPAN PPSPVPEGSE EGNSPRTDFP ASQFDDHVSR TLEETNEKSS EAWSMIHKLT
     EEKACAVQQS QKLRQELEML RRESSKKQSG GGHSLVLMLL VGLLGCVIGY ILNVRT
//
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