ID A0A0D3BFE2_BRAOL Unreviewed; 501 AA.
AC A0A0D3BFE2;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DEK-C domain-containing protein {ECO:0000259|PROSITE:PS51998};
GN Name=106328681 {ECO:0000313|EnsemblPlants:Bo3g103310.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g103310.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g103310.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g103310.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013622626.1; XM_013767172.1.
DR AlphaFoldDB; A0A0D3BFE2; -.
DR STRING; 109376.A0A0D3BFE2; -.
DR EnsemblPlants; Bo3g103310.1; Bo3g103310.1; Bo3g103310.
DR GeneID; 106328681; -.
DR Gramene; Bo3g103310.1; Bo3g103310.1; Bo3g103310.
DR KEGG; boe:106328681; -.
DR eggNOG; KOG2266; Eukaryota.
DR HOGENOM; CLU_011980_2_0_1; -.
DR OMA; KILHRIC; -.
DR OrthoDB; 298775at2759; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR044198; DEK.
DR InterPro; IPR014876; DEK_C.
DR PANTHER; PTHR13468:SF17; (RAPE) HYPOTHETICAL PROTEIN; 1.
DR PANTHER; PTHR13468; DEK PROTEIN; 1.
DR Pfam; PF08766; DEK_C; 1.
DR SUPFAM; SSF109715; DEK C-terminal domain; 1.
DR PROSITE; PS51998; DEK_C; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 385..440
FT /note="DEK-C"
FT /evidence="ECO:0000259|PROSITE:PS51998"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 204..388
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 435..501
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..67
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..268
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 269..293
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..334
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 346..361
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 440..467
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..501
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 501 AA; 56346 MW; 386725750E2EE243 CRC64;
MATETLEGKR PGVESSPAKE KEEANSHSNE EAERKNEDEL EGIKSEEEKV ETQRSRERPT
RERKKVELFS LSTPLRPTPA KSLSIEKGRG TLLRDIPNVA HQLSKRKADD NLILLHTILY
GKKAKAQMVK KNIGQFSGFV WSEKEEEKQR ARVKEKLDKC IKDKLIFFCD VLDIPISRSS
IKKEEVAAKV LDFLESPKAS RDVLLADREK QAKKRKSTPK KRKSAASSDT PPAKRKRQTK
KRDHPSDTEE GKGEGDSDSE GTKDTHDEDD AAPEEDSDHE KTETEDEEDE AEDEKPSDKK
ISSKKIKEES SAGTKGKDKQ ASAKVSKKSG EKSSKRVANS TSSPAKKQKV DHEESSKGKS
KKKSVKPQAN GSKDKGKGTN KGKVEPTREE MLEFVSKILK EVDFNTATLS TILKKLSDHF
GVDLSHRKPE VKEVIQDAIN EMTDDEVEDE DEKSVAGSDE EKEEEEKNDE AESSKEKDEE
EEKAEAESNK EKDEDEEKLK D
//
