ID A0A0D3BFJ8_BRAOL Unreviewed; 162 AA.
AC A0A0D3BFJ8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 32.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC9 {ECO:0000256|ARBA:ARBA00016672};
GN Name=106330536 {ECO:0000313|EnsemblPlants:Bo3g106840.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g106840.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g106840.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g106840.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPC9 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00006898}.
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DR RefSeq; XP_013624440.1; XM_013768986.1.
DR AlphaFoldDB; A0A0D3BFJ8; -.
DR STRING; 109376.A0A0D3BFJ8; -.
DR EnsemblPlants; Bo3g106840.1; Bo3g106840.1; Bo3g106840.
DR GeneID; 106330536; -.
DR Gramene; Bo3g106840.1; Bo3g106840.1; Bo3g106840.
DR KEGG; boe:106330536; -.
DR eggNOG; KOG4168; Eukaryota.
DR HOGENOM; CLU_092529_4_0_1; -.
DR OMA; ETHEDNA; -.
DR OrthoDB; 470029at2759; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006384; P:transcription initiation at RNA polymerase III promoter; IEA:InterPro.
DR Gene3D; 1.20.1250.40; -; 1.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR006590; RNA_pol_Rpb4/RPC9_core.
DR InterPro; IPR005574; Rpb4/RPC9.
DR InterPro; IPR038324; Rpb4/RPC9_sf.
DR InterPro; IPR038846; RPC9.
DR PANTHER; PTHR15561; CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN; 1.
DR PANTHER; PTHR15561:SF0; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9; 1.
DR Pfam; PF03874; RNA_pol_Rpb4; 1.
DR SMART; SM00657; RPOL4c; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 24..145
FT /note="RNA polymerase Rpb4/RPC9 core"
FT /evidence="ECO:0000259|SMART:SM00657"
SQ SEQUENCE 162 AA; 18023 MW; 40A1B75420C5F4D2 CRC64;
MRSFKDNERS LARLGFTQDV DVCRVKANAG ALTNFEVLNL INSKGASKDT TRVIAAIARS
EYKVCDYLNE TVASTQTLES VTTFSDKCKD FKLAKAEILN IINIRPSVDF KALLDPIIEE
PKERGIDTDG ILELVQDLLP PLPVVETQME KDQDETNNGE ES
//