ID A0A0D3BLH4_BRAOL Unreviewed; 846 AA.
AC A0A0D3BLH4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=RING-CH-type domain-containing protein {ECO:0000259|PROSITE:PS51292};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g169180.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g169180.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g169180.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3BLH4; -.
DR STRING; 109376.A0A0D3BLH4; -.
DR EnsemblPlants; Bo3g169180.1; Bo3g169180.1; Bo3g169180.
DR Gramene; Bo3g169180.1; Bo3g169180.1; Bo3g169180.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_006373_2_0_1; -.
DR OMA; TMYATEH; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16702; RING_CH-C4HC3_MARCH6; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13145:SF8; E3 UBIQUITIN LIGASE SUD1; 1.
DR PANTHER; PTHR13145; SSM4 PROTEIN; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 107..130
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 150..173
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 201..225
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 260..281
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 321..344
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 427..446
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 466..487
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 567..592
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 618..639
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 660..689
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 701..720
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 741..764
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 776..795
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 14..75
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 516..536
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 516..534
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 846 AA; 95632 MW; 2C74BC3A95D38188 CRC64;
MAQATAMARY IDDEQEDDED VCRICRTPGD ADNPLQYPCA CRGSIKFVHQ DCLLQWLSYS
KAHRCEVCKH HFSFSPLYDE KAPTRLPLKE FVVGIAMKVW RCRVSHASLR LSLMLLACLL
TVSFITFWTW RLAFVQSFVE ARRLFLSHMS TLLVLTDCLL GFLVSATIIF ILLKAASLRN
FFRHLGRNFL FNELVRIQSP LFHLAMIVFV IVACNMIFVG VVIFVPFTLG RVILHHVAAA
DLLKGFVAVP SKLYDDVTTL TVANMFAVFL YLGIIVLIRY FKGQQPLNFD RLYGVAAASI
IETIPPLLRQ LLVGIKVGTM VAYYFGVFPL MCGWWLDVCT VSMFGETMSN RVEFLSVSPL
ARSLVHWAVG VLYLSKICIC EDLLLKVLRR EALFFLYDPK DDDDVESFQF MIEEPVHKLA
RDVLLDAAKY GSLIVLLVFL PVKLAIMMAP SVFPLDISVS DPFTEIPVGI LLFTICTQFI
IEHFGLWTTV KSLVRCWFTS VCWALGLTDL LLPRPEDKVG QDNGDGEPGR QNRGPERAMD
VLPATVDPNR SLVLAGNVEK SHSEYIFVLR VVLLLLAAWV TPLLFNTALI VVPVSLGRAL
FNAIPTFPIT HGIKCNDLYG FVIGTYAFWI IISGTMYATE HLKSERTSVL LNQIWRWCGI
VFKSSVLLAI WIFIIPVLIA LVLELLVIVP MRVPVDETPV FLLYQDWALG FIFLKIWTTL
FERVEEDGFS RLQGLWVLKE IVSPILMKLL TALCVPYVLA KGVFPMLGCP LVVNSAVYRF
AWIGCLSASF FFSCAKRCHV WFINLHNSIR DDHYLVGRRL LNFEEVALAK RKSSASEDDG
EGDGDT
//
